RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 KLHL41O60662 606 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 FAM155BO75949 473 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TMEM63AO94886 807 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 EML2O95834 649 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 STSP08842 583 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 FAM153BP0C7A2 387 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 SLC2A4P14672 509 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 COX6B1P14854 86 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RAC2P15153 192 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CD1EP15812 388 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 BPIP17213 487 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 SERPINA4P29622 427 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 SSTR2P30874 369 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ADRA1BP35368 520 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 KIR2DL2P43627 348 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 MAPK9P45984 424 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 GABRB2P47870 512 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 VAV2P52735 878 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RRADP55042 308 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 GFRA1P56159 465 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 YBEYP58557 167 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RPS18P62269 152 aaKnown RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PDE1BQ01064 536 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 LRRC63Q05C16 580 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF235Q14590 738 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 KIR2DS5Q14953 304 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PARP15Q460N3 678 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PYCR3Q53H96 274 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 COBLL1Q53SF7 1204 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 LYPLAL1Q5VWZ2 237 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 FOXB2Q5VYV0 432 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 IZUMO3Q5VZ72 239 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RAET1GQ6H3X3 334 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 DENND5AQ6IQ26 1287 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PWWP2BQ6NUJ5 590 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 IGFL3Q6UXB1 125 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 KRBA2Q6ZNG9 492 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ARCQ7LC44 396 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PRSS42Q7Z5A4 293 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 FAM131BQ86XD5 332 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ZNF354CQ86Y25 554 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PASD1Q8IV76 773 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CCDC103Q8IW40 242 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 LILRB2Q8N423 598 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 LZTR1Q8N653 840 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ARFGAP1Q8N6T3 406 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 NETO2Q8NC67 525 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TM9SF4Q92544 642 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TBC1D31Q96DN5 1066 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RNF31Q96EP0 1072 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CCDC120Q96HB5 630 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ELMO2Q96JJ3 720 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 EXOC2Q96KP1 924 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RUFY1Q96T51 708 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 HERPUD2Q9BSE4 406 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 AARSD1Q9BTE6 412 aaKnown RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TBC1D10AQ9BXI6 508 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TRIM8Q9BZR9 551 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 KLC2Q9H0B6 622 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ILKAPQ9H0C8 392 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PDE7BQ9NP56 450 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 UBE2TQ9NPD8 197 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 IMPACTQ9P2X3 320 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CPNE7Q9UBL6 633 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 TNFRSF10DQ9UBN6 386 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 UBA2Q9UBT2 640 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 B4GALT6Q9UBX8 382 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CNOT8Q9UFF9 292 aaKnown RBP4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 RCOR1Q9UKL0 485 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 CFAP45Q9UL16 551 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 OSGIN2Q9Y236 505 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 HPSEQ9Y251 543 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PLEKHM1Q9Y4G2 1056 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 PKDREJQ9NTG1 2253 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 STAB1Q9NY15 2570 aa4.53□□□□□ -1.68
SNHG1-214ENST00000540865 ARHGEF17Q96PE2 2063 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM237AA0A1B0GTK4 181 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 A0A1B0GVL5 298 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 A0A1W2PQ67 120 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 OR5K4A6NMS3 321 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 DBX1A6NMT0 343 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 BECN2A8MW95 431 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 FAM72CH0Y354 149 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PSMD11O00231 422 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 E2F3O00716 465 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 TRAFD1O14545 582 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 NRDCO43847 1150 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PRICKLE3O43900 615 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 DLX3O60479 287 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RASSF9O75901 435 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 IPO13O94829 963 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 UBXN7O94888 489 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 HEXIM1O94992 359 aaKnown RBP4.52□□□□□ -1.69
SNHG1-214ENST00000540865 ALPPP05187 535 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 RAB40ALP0C0E4 278 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 MSL3P1P0C860 447 aa4.52□□□□□ -1.69
SNHG1-214ENST00000540865 PRKCAP17252 672 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms