RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 F7P08709 466 aaPredicted RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 SLC35G4P0C7Q5 338 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 CDK4P11802 303 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 BRAFP15056 766 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 AOAHP28039 575 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 GABRB3P28472 473 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 PHBP35232 272 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 ACADVLP49748 655 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 E2F1Q01094 437 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 HSPA14Q0VDF9 509 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 BOP1Q14137 746 aaKnown RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 ZNF658BQ4V348 819 aaPredicted RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 PPM1JQ5JR12 505 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 CTSL3PQ5NE16 218 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 ZNF549Q6P9A3 640 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 NAPRTQ6XQN6 538 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 OTOAQ7RTW8 1153 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 STRA8Q7Z7C7 330 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 GALNT7Q86SF2 657 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 SLCO6A1Q86UG4 719 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 SLC26A11Q86WA9 606 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 TRIM48Q8IWZ4 208 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 LILRA3Q8N6C8 439 aaPredicted RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 AVL9Q8NBF6 648 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 SLC37A2Q8TED4 501 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 FBF1Q8TES7 1133 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 TMEM159Q96B96 161 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 SH3KBP1Q96B97 665 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 CXorf40BQ96DE9 158 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 ABCG4Q9H172 646 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 STN1Q9H668 368 aaKnown RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 ZNF624Q9P2J8 865 aaPredicted RBP15.18■□□□□ 0.02
DDB1-218ENST00000540784 CPNE7Q9UBL6 633 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 PCDHGA1Q9Y5H4 931 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 RNF215Q9Y6U7 377 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 DNAH14Q0VDD8 3507 aa15.18■□□□□ 0.02
DDB1-218ENST00000540784 SLC5A10A0PJK1 596 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 OR52A4PA6NMU1 304 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 E5RI56 91 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 PPM1DO15297 605 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 ZW10O43264 779 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 VIPP01282 170 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 GP1BAP07359 652 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 PNLIPP16233 465 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 PDHA2P29803 388 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 STX2P32856 288 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 SLC19A1P41440 591 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 PREPP48147 710 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 CD151P48509 253 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 CSE1LP55060 971 aaKnown RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 KRT33BQ14525 404 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 TMED2Q15363 201 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 RPE65Q16518 533 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 CAPRIN2Q6IMN6 1127 aaKnown RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 XKR5Q6UX68 686 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 CCNI2Q6ZMN8 369 aaPredicted RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 LKAAEAR1Q8TD35 194 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 INSM2Q96T92 566 aaPredicted RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 AARSD1Q9BTE6 412 aaKnown RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 ANKZF1Q9H8Y5 726 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
DDB1-218ENST00000540784 LATS2Q9NRM7 1088 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 TOR4AQ9NXH8 423 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 NINJ2Q9NZG7 142 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 TXNDC16Q9P2K2 825 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 SLC17A6Q9P2U8 582 aa15.17■□□□□ 0.02
DDB1-218ENST00000540784 FAM159BA6NKW6 160 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 IFRD1O00458 451 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 GPC4O75487 556 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 RFPL3O75679 317 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 FTH1P19P0C7X4 201 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 GPR3P46089 330 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 FASLGP48023 281 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 HHEXQ03014 270 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 ILF2Q12905 390 aaKnown RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 PERM1Q5SV97 790 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 DGLUCYQ7Z3D6 616 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 Q8N9G6 341 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDB1-218ENST00000540784 CCDC74AQ96AQ1 378 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 FAM136AQ96C01 138 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 C12orf66Q96MD2 445 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 FERD3LQ96RJ6 166 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 SLC38A3Q99624 504 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CCDC3Q9BQI4 270 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 OR52A5Q9H2C5 316 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CDC42EP4Q9H3Q1 356 aaKnown RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 SMYD2Q9NRG4 433 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 IMP3Q9NV31 184 aaKnown RBP15.16■□□□□ 0.02
DDB1-218ENST00000540784 KLHL42Q9P2K6 505 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 HEBP2Q9Y5Z4 205 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 COLEC10Q9Y6Z7 277 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 CFAP54Q96N23 3096 aa15.16■□□□□ 0.02
DDB1-218ENST00000540784 ARID1BQ8NFD5 2236 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms