RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ARNT2Q9HBZ2 717 aa9.34□□□□□ -0.91
CLIP1-214ENST00000540539 SETD4Q9NVD3 440 aa9.34□□□□□ -0.91
CLIP1-214ENST00000540539 INTS6Q9UL03 887 aaKnown RBP9.34□□□□□ -0.91
CLIP1-214ENST00000540539 SARDHQ9UL12 918 aa9.34□□□□□ -0.91
CLIP1-214ENST00000540539 SLC6A14Q9UN76 642 aa9.34□□□□□ -0.91
CLIP1-214ENST00000540539 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
CLIP1-214ENST00000540539 A0A1B0GTQ1 180 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 PQLC2LA1A4F0 135 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 DFFAO00273 331 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SLC1A7O00341 560 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GLRA3O75311 464 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ALPPP05187 535 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 IL1R2P27930 398 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RFC2P35250 354 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RAB14P61106 215 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ACY1Q03154 408 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ORC2Q13416 577 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 INPP5AQ14642 412 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CLCA4Q14CN2 919 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SPANXN2Q5MJ10 180 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 PADI6Q6TGC4 694 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 KDELC1Q6UW63 502 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 FAM71AQ8IYT1 594 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SLC37A3Q8NCC5 494 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SLC35B2Q8TB61 432 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ELMO2Q96JJ3 720 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GPR137Q96N19 417 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 TRNT1Q96Q11 434 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 PELOQ9BRX2 385 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SORBS1Q9BX66 1292 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 BCAS3Q9H6U6 928 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ENTPD4Q9Y227 616 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 PCDHGB1Q9Y5G3 927 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 KCNMB2Q9Y691 235 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 A0A1W2PP18 115 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 HNRNPCL2B2RXH8 293 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 DSCR3O14972 297 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SGCEO43556 437 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 USP2O75604 605 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 TCF4P15884 667 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 HDCP19113 662 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 MPSTP25325 297 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GCLMP48507 274 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RAB13P51153 203 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SLC7A2P52569 658 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 NAPAP54920 295 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 LGALS3BPQ08380 585 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CD47Q08722 323 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 DUSP4Q13115 394 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 TAB1Q15750 504 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SMTNL2Q2TAL5 461 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF792Q3KQV3 632 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GLRA4Q5JXX5 417 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CLLU1Q5K131 121 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GPR139Q6DWJ6 353 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 GLYATQ6IB77 296 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 TAF2Q6P1X5 1199 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RASAL3Q86YV0 1011 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 RCOR2Q8IZ40 523 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 FATE1Q969F0 183 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 REPS1Q96D71 796 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 WBP1Q96G27 269 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 MRPL48Q96GC5 212 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CCDC17Q96LX7 622 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 INTS10Q9NVR2 710 aaKnown RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 ACTR10Q9NZ32 417 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SAE1Q9UBE0 346 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-214ENST00000540539 CTSFQ9UBX1 484 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 BAIAP2Q9UQB8 552 aa9.33□□□□□ -0.92
CLIP1-214ENST00000540539 SLC22A23A1A5C7 686 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 AQP12BA6NM10 295 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TTLL8A6PVC2 850 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 LOC110117498-PIK3R3F6TDL0 507 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ABCD4O14678 606 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 EDIL3O43854 480 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 DFNA5O60443 496 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ALDH1A1P00352 501 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PLATP00750 562 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 MT-ND1P03886 318 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 DNTTP04053 509 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 CYP3A4P08684 503 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 CD6P30203 668 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GMPRP36959 345 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ETV6P41212 452 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 KCNC1P48547 511 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 CLCN4P51793 760 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 FOXK2Q01167 660 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TFDP2Q14188 446 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TSC22D1Q15714 1073 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ETFDHQ16134 617 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 FLYWCH1Q4VC44 716 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SYT6Q5T7P8 510 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms