RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MAGOHP61326 146 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PPARDQ03181 441 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLC18A2Q05940 514 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HSPA14Q0VDF9 509 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DLG1Q12959 904 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TAF1BQ53T94 588 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ACSBG2Q5FVE4 666 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 AMZ2Q86W34 360 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PARGQ86W56 976 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PLD6Q8N2A8 252 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SPATA6LQ8N4H0 392 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 OR2M4Q96R27 311 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TCEAL2Q9H3H9 227 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SYTL2Q9HCH5 934 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 FSCN3Q9NQT6 498 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SENP1Q9P0U3 644 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CDYLQ9Y232 598 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DNAJC16Q9Y2G8 782 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ST14Q9Y5Y6 855 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SPTBN2O15020 2390 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 A0A087X1B8 175 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLC5A10A0PJK1 596 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PRR5-ARHGAP8B1AHC4 643 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 H3BQF6 201 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KPNA5O15131 536 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GPC4O75487 556 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TSPAN12O95859 305 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GSTM1P09488 218 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CCDC166P0CW27 439 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HK3P52790 923 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 C21orf59P57076 290 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GSTM4Q03013 218 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NFE2L1Q14494 772 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GBX1Q14549 363 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TEAD4Q15561 434 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CSRP2Q16527 193 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 INSCQ1MX18 579 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PLEKHS1Q5SXH7 462 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 FAM83HQ6ZRV2 1179 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 VRK3Q8IV63 474 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CFAP206Q8IYR0 622 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CENPLQ8N0S6 344 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HM13Q8TCT9 377 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 EEF1AKMT1Q8WVE0 214 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KCTD4Q8WVF5 259 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CABS1Q96KC9 395 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 UBXN10Q96LJ8 280 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TIMM29Q9BSF4 260 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLC13A1Q9BZW2 595 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TMEM168Q9H0V1 697 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 COG4Q9H9E3 785 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ANKRD6Q9Y2G4 727 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ACTL7BQ9Y614 415 aa18.56■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CNOT1A5YKK6 2376 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 RASGRP1O95267 797 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TNFP01375 233 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 APOA4P06727 396 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PREPP48147 710 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 BNC1Q01954 994 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CSHL1Q14406 222 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TTLL9Q3SXZ7 439 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PRR23CQ6ZRP0 262 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CLEC14AQ86T13 490 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TBC1D1Q86TI0 1168 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PHACTR4Q8IZ21 702 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 BANPQ8N9N5 519 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ASZ1Q8WWH4 475 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SKA1Q96BD8 255 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SMC6Q96SB8 1091 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 UNKQ9C0B0 810 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KLC4Q9NSK0 619 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ZNF358Q9NW07 568 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DNAJC28Q9NX36 388 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DLL3Q9NYJ7 618 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TSR3Q9UJK0 312 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KCNK6Q9Y257 313 aa18.55■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PRR19A6NJB7 356 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HMGB1P1B2RPK0 211 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 LIN7AO14910 233 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SPAG7O75391 227 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLCO2B1O94956 709 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DGKAP23743 735 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PDHA2P29803 388 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MPLP40238 635 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SLC26A3P40879 764 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 IL2P60568 153 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DMPKQ09013 629 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TCEA2Q15560 299 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 RSPO4Q2I0M5 234 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KIF19Q2TAC6 998 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SYTL3Q4VX76 610 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PRAMEF14Q5SWL7 426 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TCEAL6Q6IPX3 200 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CDHR3Q6ZTQ4 885 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CCDC91Q7Z6B0 441 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NKAPQ8N5F7 415 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CCL4L1Q8NHW4 92 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TCEAL3Q969E4 200 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TMEM159Q96B96 161 aa18.54■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NXNL1Q96CM4 212 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms