RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 DBF4BQ8NFT6 615 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 OR6C4Q8NGE1 309 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 TMEM171Q8WVE6 324 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 LPGAT1Q92604 370 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 THRSPQ92748 146 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 DNASE1L2Q92874 299 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 ARHGEF26Q96DR7 871 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 GDAP1L1Q96MZ0 367 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 ZNF830Q96NB3 372 aaPredicted RBP5.99□□□□□ -1.45
MRE11-209ENST00000540013 HAPLN3Q96S86 360 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 ALG8Q9BVK2 526 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 GLIS2Q9BZE0 524 aaPredicted RBP5.99□□□□□ -1.45
MRE11-209ENST00000540013 TPSD1Q9BZJ3 242 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 COQ10BQ9H8M1 238 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 USP29Q9HBJ7 922 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 PIH1D3Q9NQM4 214 aaKnown RBP5.99□□□□□ -1.45
MRE11-209ENST00000540013 ASAH2Q9NR71 780 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 DNAJC11Q9NVH1 559 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 VPS18Q9P253 973 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 KIAA1456Q9P272 454 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 HDAC6Q9UBN7 1215 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 SUN2Q9UH99 717 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 NDRG4Q9ULP0 352 aaKnown RBP5.99□□□□□ -1.45
MRE11-209ENST00000540013 SSX2IPQ9Y2D8 614 aa5.99□□□□□ -1.45
MRE11-209ENST00000540013 WBP11Q9Y2W2 641 aaKnown RBP5.99□□□□□ -1.45
MRE11-209ENST00000540013 MED23Q9ULK4 1368 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CYP3A7-CYP3A51PA0A087WV96 503 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 A0A087X1B8 175 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 SNAP23O00161 211 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CXCL11O14625 94 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 TO15178 435 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 EIF3DO15371 548 aaKnown RBP eCLIP5.98□□□□□ -1.45
MRE11-209ENST00000540013 SLC25A12O75746 678 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 TGFAP01135 160 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CSF1RP07333 972 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CYP4B1P13584 511 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ITIH1P19827 911 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 MMP8P22894 467 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CYP3A7P24462 503 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CHRNA3P32297 505 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 SOX6P35712 828 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 GJC1P36383 396 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 GABRB2P47870 512 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 PDE1AP54750 535 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 GALCP54803 685 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 PMP22Q01453 160 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 MAP2K1Q02750 393 aaPredicted RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 ACSM2AQ08AH3 577 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 GPM6BQ13491 265 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ALKBH1Q13686 389 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 PTPRRQ15256 657 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 SNAPC1Q16533 368 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 AASDHQ4L235 1098 aaPredicted RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 ACSM2BQ68CK6 577 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 PM20D1Q6GTS8 502 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 PSRC1Q6PGN9 363 aaPredicted RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 AFTPHQ6ULP2 937 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 C16orf89Q6UX73 402 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 TMEM108Q6UXF1 575 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 SLC36A4Q6YBV0 504 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ARMCX2Q7L311 632 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 MFN1Q8IWA4 741 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ABRAQ8N0Z2 381 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CPXM2Q8N436 756 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.98□□□□□ -1.45
MRE11-209ENST00000540013 C11orf44Q8N8P7 122 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 OR52M1Q8NGK5 317 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 KCNJ9Q92806 393 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CASP10Q92851 521 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 MIB2Q96AX9 1013 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 FAM136AQ96C01 138 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 TRMT61AQ96FX7 289 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 SAMD8Q96LT4 415 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 RMDN2Q96LZ7 410 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 HNRNPABQ99729 332 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 C17orf80Q9BSJ5 609 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 INPP5KQ9BT40 448 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 H2AFJQ9BTM1 129 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 VN1R3Q9BXE9 311 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 GCOM2Q9BZD3 368 aaPredicted RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 SMOC2Q9H3U7 446 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CRLF2Q9HC73 371 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 CENPMQ9NSP4 180 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 RBM28Q9NW13 759 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 MTMR4Q9NYA4 1195 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 UTP6Q9NYH9 597 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 IL17BQ9UHF5 180 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 DDX25Q9UHL0 483 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 TLK1Q9UKI8 766 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ITGA11Q9UKX5 1188 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 STRAPQ9Y3F4 350 aaKnown RBP5.98□□□□□ -1.45
MRE11-209ENST00000540013 CMAHPQ9Y471 501 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 ZNF609O15014 1411 aa5.98□□□□□ -1.45
MRE11-209ENST00000540013 AKAP11Q9UKA4 1901 aa5.97□□□□□ -1.45
MRE11-209ENST00000540013 A0A1B0GWJ7 208 aa5.97□□□□□ -1.45
MRE11-209ENST00000540013 A0A1W2PR77 199 aa5.97□□□□□ -1.45
MRE11-209ENST00000540013 LNP1A1A4G5 178 aa5.97□□□□□ -1.45
MRE11-209ENST00000540013 USP17L23D6RBM5 183 aa5.97□□□□□ -1.45
MRE11-209ENST00000540013 L7N2F9 121 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms