RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KLHL38Q2WGJ6 581 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 AARS2Q5JTZ9 985 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF449Q6P9G9 518 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 TAF8Q7Z7C8 310 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 GALNT7Q86SF2 657 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 AMZ2Q86W34 360 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 LMNTD2Q8IXW0 634 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 FAM181AQ8N9Y4 354 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 FAM46DQ8NEK8 389 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 SCG3Q8WXD2 468 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 FAM136AQ96C01 138 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 RMDN2Q96LZ7 410 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 NDNQ99608 321 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 NRTNQ99748 197 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 OLFM1Q99784 485 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 CCM2Q9BSQ5 444 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 AARSD1Q9BTE6 412 aaKnown RBP12.74□□□□□ -0.37
CCDC42-202ENST00000539522 GSDMCQ9BYG8 508 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 OR52A5Q9H2C5 316 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 ACSS3Q9H6R3 686 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 COG4Q9H9E3 785 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 FAM8A1Q9UBU6 413 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
CCDC42-202ENST00000539522 TRBV23OR9-2A0A075B6M9 112 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 C17orf113A0A1B0GUU1 675 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 UBA6A0AVT1 1052 aaPredicted RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 GPC4O75487 556 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PKMP14618 531 aaKnown RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PMLP29590 882 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 GRK6P43250 576 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 ILF3Q12906 894 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 RASA2Q15283 850 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 CAPRIN2Q6IMN6 1127 aaKnown RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 IYDQ6PHW0 289 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 TMEM207Q6UWW9 146 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 ABRAXAS1Q6UWZ7 409 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 KIAA0408Q6ZU52 694 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PIM3Q86V86 326 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 ZC3HC1Q86WB0 502 aaKnown RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 TDRPQ86YL5 185 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 CFAP206Q8IYR0 622 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SDR16C5Q8N3Y7 309 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SFRP1Q8N474 314 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 DEFB124Q8NES8 71 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SETD7Q8WTS6 366 aaKnown RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 ZDHHC1Q8WTX9 485 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PGM2Q96G03 612 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 DLL3Q9NYJ7 618 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 SIRPGQ9P1W8 387 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
CCDC42-202ENST00000539522 ASXL3Q9C0F0 2248 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 PCNX2A6NKB5 2137 aa12.73□□□□□ -0.37
CCDC42-202ENST00000539522 EXOC1LA0A1B0GW35 172 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 B4DGG1 531 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 PPM1DO15297 605 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 SNX2O60749 519 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 DKK1O94907 266 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 WISP3O95389 354 aaPredicted RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ESR1P03372 595 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ANXA6P08133 673 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 TPBGLP0DKB5 382 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RALBP11234 206 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 F3P13726 295 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ACADLP28330 430 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 GMPRP36959 345 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 SLC19A1P41440 591 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 MSH2P43246 934 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 CSRP3P50461 194 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RNF187Q5TA31 235 aaPredicted RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 AGAP9Q5VTM2 703 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ZCCHC8Q6NZY4 707 aaKnown RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 DUS1LQ6P1R4 473 aaKnown RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 WASH2PQ6VEQ5 465 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 SLC26A11Q86WA9 606 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RIBC1Q8N443 379 aaPredicted RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 HM13Q8TCT9 377 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 CD200R1Q8TD46 325 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 CALML6Q8TD86 181 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms