RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 WT1P19544 449 aaPredicted RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 ACADLP28330 430 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 SLC5A2P31639 672 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PREPP48147 710 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 NPY2RP49146 381 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 LMAN1P49257 510 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 EPHA4P54764 986 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 GNG11P61952 73 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 BASP1P80723 227 aaKnown RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 CCDC173Q0VFZ6 552 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 CLN3Q13286 438 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 GTF2H3Q13889 308 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 MAP9Q49MG5 647 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 MSS51Q4VC12 460 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PCID2Q5JVF3 399 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 C4orf22Q6V702 233 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PACS1Q6VY07 963 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 CERS6Q6ZMG9 384 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 TAS2R42Q7RTR8 314 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 GSTA5Q7RTV2 222 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 VRK3Q8IV63 474 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 IGDCC3Q8IVU1 814 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PHC3Q8NDX5 983 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 MCUQ8NE86 351 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 OR4L1Q8NH43 312 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 USP7Q93009 1102 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 ZNF514Q96K75 400 aaPredicted RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 SIGLEC10Q96LC7 697 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PPM1MQ96MI6 270 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 TTC25Q96NG3 672 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 WDR83Q9BRX9 315 aaKnown RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 CCM2Q9BSQ5 444 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 ZCCHC2Q9C0B9 1178 aaKnown RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 TWSG1Q9GZX9 223 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PRORYQ9H606 182 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 COG4Q9H9E3 785 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 APMAPQ9HDC9 416 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 SIDT1Q9NXL6 827 aaKnown RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 IL1RAPL1Q9NZN1 696 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 SEMA5BQ9P283 1151 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PISDQ9UG56 409 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 ACSL5Q9ULC5 683 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 CDYLQ9Y232 598 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PCDHGA7Q9Y5G6 932 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 MN1Q10571 1320 aaPredicted RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 GCN1Q92616 2671 aaKnown RBP8.21□□□□□ -1.1
SPARC-208ENST00000538026 SPTA1P02549 2419 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 HEATR5BQ9P2D3 2071 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SLC5A10A0PJK1 596 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 TMX2-CTNND1H3BSU7 103 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 GOLGA8MH3BSY2 632 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 HGSO14964 777 aaPredicted RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 NVLO15381 856 aaKnown RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 CAPN5O15484 640 aaPredicted RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 BANF1O75531 89 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 UBXN7O94888 489 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 CCR7P32248 378 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 MAPK9P45984 424 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 FNTAP49354 379 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SH3BP2P78314 561 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 MRPS25P82663 173 aaKnown RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 CDK16Q00536 496 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 EIF3IQ13347 325 aaKnown RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 TRA2AQ13595 282 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPARC-208ENST00000538026 ITIH4Q14624 930 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 ZNF789Q5FWF6 425 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SNAP47Q5SQN1 464 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 RNASEH2BQ5TBB1 312 aaKnown RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 PCSK4Q6UW60 755 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 ZFAND4Q86XD8 727 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 DTX1Q86Y01 620 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 UNC5BQ8IZJ1 945 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 LSMEM2Q8N112 164 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 LMNTD1Q8N9Z9 388 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 OR6P1Q8NGX9 317 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 OR10G6Q8NH81 332 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 HM13Q8TCT9 377 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SLCO2A1Q92959 643 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 PEX13Q92968 403 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SH3KBP1Q96B97 665 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 RNF31Q96EP0 1072 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 DCUN1D1Q96GG9 259 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 CAPZA3Q96KX2 299 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 C9orf72Q96LT7 481 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 C12orf66Q96MD2 445 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 PWWP2AQ96N64 755 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 BIRC8Q96P09 236 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SERPINB12Q96P63 405 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 STRADBQ9C0K7 418 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 P2RY12Q9H244 342 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
SPARC-208ENST00000538026 POT1Q9NUX5 634 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 GALPQ9UBC7 116 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 KLHL3Q9UH77 587 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 PCYOX1Q9UHG3 505 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 SLC24A2Q9UI40 661 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 ACSL6Q9UKU0 697 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms