RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZNF649Q9BS31 505 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FBXL3Q9UKT7 428 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ASF1AQ9Y294 204 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MPZL2O60487 215 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RFPL1O75677 317 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 F9P00740 461 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 KELP23276 732 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FRRS1Q6ZNA5 592 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DCDC5Q6ZRR9 648 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 USP45Q70EL2 814 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 LHFPL3Q86UP9 236 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FOXRED2Q8IWF2 684 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ATG10Q9H0Y0 220 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MGAT4CQ9UBM8 478 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PRR12Q9ULL5 1215 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CLCA3PQ9Y6N3 262 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CHD1O14646 1710 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 NEDD8-MDP1E9PL57 170 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FSCN2O14926 492 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TOXO94900 526 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ALDH1A1P00352 501 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CD72P21854 359 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PBX1P40424 430 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TROAPQ12815 778 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 POU4F3Q15319 338 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 EARS2Q5JPH6 523 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FAM198BQ6UWH4 519 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DET1Q7L5Y6 550 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM199Q8N511 208 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF781Q8N8C0 355 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RNF31Q96EP0 1072 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PANX1Q96RD7 426 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 KCNN2Q9H2S1 579 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SSX4O60224 188 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ODC1P11926 461 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 OPRL1P41146 370 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 BIKQ13323 160 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 GRB14Q14449 540 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ZDHHC21Q8IVQ6 265 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FAM71AQ8IYT1 594 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CARNMT1Q8N4J0 409 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 LRRC57Q8N9N7 239 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 KCNH4Q9UQ05 1017 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 hCG_1818297A0A087WSY0 165 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FUOMA2VDF0 154 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SRCP12931 536 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SLC11A2P49281 568 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 BTN1A1Q13410 526 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 BAATQ14032 418 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CLEC6AQ6EIG7 209 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SLC25A25Q6KCM7 469 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FAM122CQ6P4D5 195 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 OR6J1Q8NGC5 347 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CCDC120Q96HB5 630 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CMAHPQ9Y471 501 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DOPEY1Q5JWR5 2465 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TAF1P21675 1872 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 INMT-MINDY4F8WBC2 141 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TSTD3H0UI37 97 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TNFRSF10AO00220 468 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 EEF1E1O43324 174 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NUDT6P53370 316 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MBTD1Q05BQ5 628 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 C6orf89Q6UWU4 347 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 C14orf80Q86SX3 495 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 WDR49Q8IV35 697 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OR2L3Q8NG85 312 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA20Q8TB22 786 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 LINGO1Q96FE5 620 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 COQ10AQ96MF6 247 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 EBF4Q9BQW3 602 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NTN4Q9HB63 628 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TUBG2Q9NRH3 451 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TNS3Q68CZ2 1445 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 A2ML1A8K2U0 1454 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 HMGB3O15347 200 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MAGEA11P43364 429 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TMBIM6P55061 237 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 RHDQ02161 417 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 GBE1Q04446 702 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 C11orf65Q8NCR3 313 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PIGBQ92521 554 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CLCC1Q96S66 551 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 KCTD15Q96SI1 283 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 BIN3Q9NQY0 253 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MAP4K5Q9Y4K4 846 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 KRBA1A5PL33 1030 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 COQ9O75208 318 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 USP17L7P0C7H9 530 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 STAG3L1P0CL83 205 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OGNP20774 298 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ACO1P21399 889 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 DNASE1P24855 282 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MAP2K3P46734 347 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 IQCCQ4KMZ1 466 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ARSKQ6UWY0 536 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MARVELD2Q8N4S9 558 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ANKRD52Q8NB46 1076 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms