RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CAPN1P07384 714 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PIK3CGP48736 1102 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 HTR6P50406 440 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 RPS6KA2Q15349 733 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 VPS26BQ4G0F5 336 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 BEND7Q8N7W2 519 aaPredicted RBP17.16■□□□□ 0.34
SNX17-210ENST00000537606 VN1R2Q8NFZ6 395 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 OR4F6Q8NGB9 312 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 METTL6Q8TCB7 284 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 SLC2A11Q9BYW1 496 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 KLHL4Q9C0H6 718 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 FAM83DQ9H4H8 585 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 IPPKQ9H8X2 491 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PKD2L2Q9NZM6 624 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 FBXO10Q9UK96 956 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PLXNB3Q9ULL4 1909 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 YBX2Q9Y2T7 364 aaKnown RBP17.16■□□□□ 0.34
SNX17-210ENST00000537606 OARD1Q9Y530 152 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PRORSD1PA6NEY8 169 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 A6NHS1 94 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 SOBPA7XYQ1 873 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 NRP2O60462 931 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 DNAJA2O60884 412 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 CHEK2O96017 543 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 VIPR1P32241 457 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PTPN5P54829 565 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 GRIN2CQ14957 1233 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PCBP2Q15366 365 aaKnown RBP eCLIP17.16■□□□□ 0.347e-11■■■□□ 17.7
SNX17-210ENST00000537606 MAPRE2Q15555 327 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 SPATA24Q86W54 205 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 LILRA2Q8N149 483 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PQLC1Q8N2U9 271 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 COPS7BQ9H9Q2 264 aaPredicted RBP17.16■□□□□ 0.34
SNX17-210ENST00000537606 WWOXQ9NZC7 414 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PTBP2Q9UKA9 531 aaKnown RBP17.16■□□□□ 0.34
SNX17-210ENST00000537606 SARDHQ9UL12 918 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 PSMD13Q9UNM6 376 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 SLC8A2Q9UPR5 921 aa17.16■□□□□ 0.34
SNX17-210ENST00000537606 LIN7AO14910 233 aaPredicted RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 XPAP23025 273 aaPredicted RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 YBX1P67809 324 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 BOP1Q14137 746 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 SHHQ15465 462 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 VRK3Q8IV63 474 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 NPAS3Q8IXF0 933 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 MIER2Q8N344 545 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 PDPRQ8NCN5 879 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 TEX37Q96LM6 180 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 ZNF382Q96SR6 550 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 TMEM79Q9BSE2 394 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 SLC25A23Q9BV35 468 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 RIOK2Q9BVS4 552 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 IGFLR1Q9H665 355 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 SPTBN5Q9NRC6 3674 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 C16orf96A6NNT2 1141 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 UPK3BL1B0FP48 263 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 UPK3BL2E5RIL1 263 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 KPNA3O00505 521 aaPredicted RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 TRIM38O00635 465 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 BCAS2O75934 225 aaPredicted RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 ZCCHC18P0CG32 403 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 VCLP18206 1134 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 IL27RAQ6UWB1 636 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 GATA6Q92908 595 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 FGF13Q92913 245 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 KCTD5Q9NXV2 234 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 DPP7Q9UHL4 492 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 TMCO1Q9UM00 188 aa17.15■□□□□ 0.34
SNX17-210ENST00000537606 TNPO3Q9Y5L0 923 aaKnown RBP17.15■□□□□ 0.34
SNX17-210ENST00000537606 OR2AG2A6NM03 316 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 ADH1CP00326 375 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 CYP2A6P11509 494 aaPredicted RBP17.14■□□□□ 0.33
SNX17-210ENST00000537606 TCF3P15923 654 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 TTLL9Q3SXZ7 439 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 ZNF805Q5CZA5 627 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
SNX17-210ENST00000537606 Q6ZSR9 355 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 GET4Q7L5D6 327 aaPredicted RBP17.14■□□□□ 0.33
SNX17-210ENST00000537606 PLPP6Q8IY26 295 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 RHBDF1Q96CC6 855 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 TRIM8Q9BZR9 551 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
SNX17-210ENST00000537606 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 PLK4O00444 970 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 FFAR3O14843 346 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 GPR42O15529 346 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
SNX17-210ENST00000537606 ATP1B2P14415 290 aaPredicted RBP17.13■□□□□ 0.33
SNX17-210ENST00000537606 CAPN3P20807 821 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 ACADVLP49748 655 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 ATP4BP51164 291 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 ST8SIA6P61647 398 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 XKR7Q5GH72 579 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
SNX17-210ENST00000537606 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
SNX17-210ENST00000537606 CYP2R1Q6VVX0 501 aa17.13■□□□□ 0.33
SNX17-210ENST00000537606 MILR1Q7Z6M3 343 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms