RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SPANXN3Q5MJ09 141 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 STEAP4Q687X5 459 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CNSTQ6PJW8 725 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 TMPRSS7Q7RTY8 843 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CCDC25Q86WR0 208 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 TRIM48Q8IWZ4 208 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 BBOF1Q8ND07 529 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 ART4Q93070 314 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CXorf40BQ96DE9 158 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CERS2Q96G23 380 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 NUDT22Q9BRQ3 303 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 SARS2Q9NP81 518 aaKnown RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 GALPQ9UBC7 116 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CLCA2Q9UQC9 943 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 RUVBL2Q9Y230 463 aaKnown RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 DNMT3AQ9Y6K1 912 aaPredicted RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 KNTC1P50748 2209 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 IGHV1OR21-1A0A087WYE8 117 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 KIR2DS5A0A0G2JLQ3 304 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 A0A0G2JNG1 304 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 MAGEB16A2A368 324 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 KIR2DS3K7RE56 304 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SMAPO00193 183 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 NTN3O00634 580 aaPredicted RBP13.71□□□□□ -0.21
VPS11-205ENST00000534551 CSO75390 466 aaKnown RBP13.71□□□□□ -0.21
VPS11-205ENST00000534551 MT-CO3P00414 261 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 FTH1P02794 183 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 OR56A5P0C7T3 313 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 MPSTP25325 297 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SSTR1P30872 391 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 HALP42357 657 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 PPM1FP49593 454 aaPredicted RBP13.71□□□□□ -0.21
VPS11-205ENST00000534551 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS11-205ENST00000534551 SPIDRQ14159 915 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 GPR18Q14330 331 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 KIR2DS5Q14953 304 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SYTL3Q4VX76 610 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 ARMC3Q5W041 872 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 PTRHD1Q6GMV3 140 aaKnown RBP13.71□□□□□ -0.21
VPS11-205ENST00000534551 ZNF549Q6P9A3 640 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 USP53Q70EK8 1073 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SLC9B2Q86UD5 537 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 C9orf72Q96LT7 481 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 BIRC8Q96P09 236 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 NDNQ99608 321 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 TTC1Q99614 292 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SLC38A3Q99624 504 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SLC30A3Q99726 388 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 ZMYND15Q9H091 742 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 VPS37BQ9H9H4 285 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 EPB41L5Q9HCM4 733 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 SMYD2Q9NRG4 433 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 ZDHHC18Q9NUE0 388 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 GNPTGQ9UJJ9 305 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 FBXO5Q9UKT4 447 aa13.71□□□□□ -0.21
VPS11-205ENST00000534551 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 SLC5A10A0PJK1 596 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 TTC4O95801 387 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 S1PR4O95977 384 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 VIPP01282 170 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 SLC2A4P14672 509 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 TYRP1P17643 537 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS11-205ENST00000534551 GABRB3P28472 473 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 ECHS1P30084 290 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 PGGT1BP53609 377 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 PPP1CAP62136 330 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 E2F1Q01094 437 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 TUBB2AQ13885 445 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 CAPRIN2Q6IMN6 1127 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 TMEM26Q6ZUK4 368 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 GSPT2Q8IYD1 628 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 C2CD4AQ8NCU7 369 aaPredicted RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 OR6C4Q8NGE1 309 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 SEC14L1Q92503 715 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 RSC1A1Q92681 617 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 ATXN7L3BQ96GX2 97 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 GFM1Q96RP9 751 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 FAM167BQ9BTA0 163 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 HGH1Q9BTY7 390 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 TUBB2BQ9BVA1 445 aa13.7□□□□□ -0.22
VPS11-205ENST00000534551 PPANQ9NQ55 473 aaKnown RBP13.7□□□□□ -0.22
VPS11-205ENST00000534551 POT1Q9NUX5 634 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms