RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 B4E171 279 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 C19orf84I3L1E1 186 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 I6L893 689 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 M0QYT0 321 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NEMP1O14524 444 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 XPO1O14980 1071 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA0391O15091 583 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF185O15231 689 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ALOX15BO15296 676 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 APOL3O95236 402 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CPNE6O95741 557 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CD160O95971 181 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 F9P00740 461 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 TNFP01375 233 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RPN1P04843 607 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PCCBP05166 539 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ALPIP09923 528 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 P4HA1P13674 534 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CD19P15391 556 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CDK11BP21127 795 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NFKBIAP25963 317 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 AK4P27144 223 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CSTF2P33240 577 aaKnown RBP eCLIP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 TSPAN7P41732 249 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PIK3CAP42336 1068 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 KIR2DL3P43628 341 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 AVPR1BP47901 424 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 LEPRP48357 1165 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 POLD2P49005 469 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NEK3P51956 506 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PGDP52209 483 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 COPB1P53618 953 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 LIMK2P53671 638 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PMS2P54278 862 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RNASE9P60153 205 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MC2RQ01718 297 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SULT2A1Q06520 285 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 LRMPQ12912 555 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SEMA5AQ13591 1074 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ERCC6LQ2NKX8 1250 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ANO6Q4KMQ2 910 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 C14orf28Q4W4Y0 310 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ALFQ53S48 1182 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CARD16Q5EG05 197 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ZRANB3Q5FWF4 1079 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 DCAF17Q5H9S7 520 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CT47A1Q5JQC4 288 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ATXN7L2Q5T6C5 722 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ARHGAP17Q68EM7 881 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SPECC1LQ69YQ0 1117 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA1161Q6NSJ0 714 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MSANTD2Q6P1R3 559 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CNNM4Q6P4Q7 775 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 LVRNQ6Q4G3 990 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SPNS3Q6ZMD2 512 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MACC1Q6ZN28 852 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RHOUQ7L0Q8 258 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PHLDB2Q86SQ0 1253 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 TTC7BQ86TV6 843 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 FJX1Q86VR8 437 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 GKN2Q86XP6 184 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PRIMA1Q86XR5 153 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC65Q8IXS2 484 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 GRAMD1CQ8IYS0 662 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SIX6OS1Q8N1H7 587 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RYBPQ8N488 228 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 BEND2Q8NDZ0 799 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 OR7D4Q8NG98 312 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NRGNQ92686 78 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 EEF2KMTQ96G04 330 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 PDXPQ96GD0 296 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 C16orf92Q96LL3 132 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 KLHL32Q96NJ5 620 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CLUHP3Q96NS8 147 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 RPRD1AQ96P16 312 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 HAPLN3Q96S86 360 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SMR3AQ99954 134 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 DDX50Q9BQ39 737 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 HEPHQ9BQS7 1158 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 LLPHQ9BRT6 129 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 APOOQ9BUR5 198 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 DDA1Q9BW61 102 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 NUDT9Q9BW91 350 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ASPSCR1Q9BZE9 553 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 B3GNT4Q9C0J1 378 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 INTS2Q9H0H0 1204 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SIK2Q9H0K1 926 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 ZDHHC6Q9H6R6 413 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CYP3A43Q9HB55 503 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 METTL14Q9HCE5 456 aaKnown RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 FGF22Q9HCT0 170 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MLXIPLQ9NP71 852 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 CISHQ9NSE2 258 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 DMAC2Q9NW81 257 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MPP6Q9NZW5 540 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 VPS51Q9UID3 782 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 MOSPD1Q9UJG1 213 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC25A13Q9UJS0 675 aa2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 FBXO2Q9UK22 296 aaPredicted RBP2.96□□□□□ -1.94
CHMP4A-208ENST00000534106 TSPAN16Q9UKR8 245 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 353 ms