RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TCRBV7S3A2	A0A539	114 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM247	A6NEH6	219 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	OOEP	A6NGQ2	149 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	MAGEB17	A8MXT2	336 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979		K7EPI3	171 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SLC33A1	O00400	549 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CLIC2	O15247	247 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SPRY3	O43610	288 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CELF2	O95319	508 aa	Known RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	HEXB	P07686	556 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	FCGR2A	P12318	317 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF182	P17025	639 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TNFSF8	P32971	234 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	HSPA4	P34932	840 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	KHK	P50053	298 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	LUM	P51884	338 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ARSF	P54793	590 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ADAR	P55265	1226 aa	Known RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CLDN2	P57739	230 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ZP1	P60852	638 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TEF	Q10587	303 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SNAPC1	Q16533	368 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ME3	Q16798	604 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	DUSP6	Q16828	381 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	MYLK3	Q32MK0	819 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CBWD6	Q4V339	395 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF585B	Q52M93	769 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CBWD3	Q5JTY5	395 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	RARS2	Q5T160	578 aa	Known RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	C6orf163	Q5TEZ5	329 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	OTUD1	Q5VV17	481 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979		Q6ZTK2	550 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	PPP1R42	Q7Z4L9	355 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	MCEMP1	Q8IX19	187 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	HACE1	Q8IYU2	909 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SCYL3	Q8IZE3	742 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM217	Q8N7C4	229 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	PRR26	Q8N8Z3	221 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	MRPL43	Q8N983	215 aa	Known RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	NHLRC2	Q8NBF2	726 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ELP5	Q8TE02	316 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM170A	Q8WVE7	144 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SYAP1	Q96A49	352 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	BBS4	Q96RK4	519 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	PKP4	Q99569	1192 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SEPT5	Q99719	369 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	C1QTNF5	Q9BXJ0	243 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	KRTAP2-2	Q9BYT5	123 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	NUF2	Q9BZD4	464 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	KRT23	Q9C075	422 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ABCG8	Q9H221	673 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	HSD3B7	Q9H2F3	369 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	HIPK3	Q9H422	1215 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ANKZF1	Q9H8Y5	726 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	IARS2	Q9NSE4	1012 aa	Known RBP	4.61	□□□□□ -1.67
ATM-223	ENST00000533979	FBXO40	Q9UH90	709 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF148	Q9UQR1	794 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	FAM96B	Q9Y3D0	163 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	AP1M2	Q9Y6Q5	423 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	UTY	O14607	1347 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	MST1R	Q04912	1400 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	SYNM	O15061	1565 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CFAP74	Q9C0B2	1584 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	KIF14	Q15058	1648 aa		4.61	□□□□□ -1.67
ATM-223	ENST00000533979	CDC42BPB	Q9Y5S2	1711 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	STMND1	H3BQB6	276 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ACOT8	O14734	319 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SLC30A4	O14863	429 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	OGG1	O15527	345 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	VEGFD	O43915	354 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SMPD2	O60906	423 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	MT-CYB	P00156	380 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	LCAT	P04180	440 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	FAM58BP	P0C7Q3	252 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ADRA2C	P18825	462 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ANXA7	P20073	488 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ITGAX	P20702	1163 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ACADL	P28330	430 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SKIV2L2	P42285	1042 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	MATR3	P43243	847 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ENTPD1	P49961	510 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SLC26A5	P58743	744 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SELENOV	P59797	346 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	DSC1	Q08554	894 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	DLG2	Q15700	870 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CDON	Q4KMG0	1287 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ARL13A	Q5H913	290 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	KDELC1	Q6UW63	502 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	C15orf39	Q6ZRI6	1047 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	TSPAN33	Q86UF1	283 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	KLHL7	Q8IXQ5	586 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ZDHHC23	Q8IYP9	409 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SMRP1	Q8NCR6	262 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	RBM15B	Q8NDT2	890 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	NEUROG1	Q92886	237 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	TEKT1	Q969V4	418 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms