RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF449Q6P9G9 518 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 BORAQ6PGQ7 559 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 C6orf15Q6UXA7 325 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 OOSP2Q86WS3 158 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 PPP1R3BQ86XI6 285 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 KLHDC8BQ8IXV7 354 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 TAB3Q8N5C8 712 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 SIDT2Q8NBJ9 832 aaKnown RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 SLC35B2Q8TB61 432 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 DNAJC1Q96KC8 554 aaKnown RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 CATSPER2Q96P56 530 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 CCM2Q9BSQ5 444 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 TSGA10Q9BZW7 698 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 PDE7BQ9NP56 450 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 HRASLS2Q9NWW9 162 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 ZDHHC3Q9NYG2 299 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 HEBP2Q9Y5Z4 205 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 CAPN6Q9Y6Q1 641 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 HELZ2Q9BYK8 2649 aaKnown RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 ZNF106Q9H2Y7 1883 aaKnown RBP15.08■□□□□ 0.01
CPSF1-211ENST00000533492 IGHV5-51A0A0C4DH38 117 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 TCRBV7S2A1N4TA0A589 114 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 UBA6A0AVT1 1052 aaPredicted RBP15.08■□□□□ 0
CPSF1-211ENST00000533492 NKX2-8O15522 239 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 KIAA0754O94854 1291 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 CCNYL3P0C7X3 344 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 PRKAR1AP10644 381 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 ZNF28P17035 718 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 NDUFS1P28331 727 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0
CPSF1-211ENST00000533492 PRLHRP49683 370 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 GDF10P55107 478 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 PPP1CAP62136 330 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 MC1RQ01726 317 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 POU6F1Q14863 301 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0
CPSF1-211ENST00000533492 DUS1LQ6P1R4 473 aaKnown RBP15.08■□□□□ 0
CPSF1-211ENST00000533492 LINC00523Q86TU6 105 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 SERPINA9Q86WD7 417 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 HM13Q8TCT9 377 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 STYXQ8WUJ0 223 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 RNF31Q96EP0 1072 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 STAMBPL1Q96FJ0 436 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 CD180Q99467 661 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 MAP3K3Q99759 626 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 VPS37BQ9H9H4 285 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 NLE1Q9NVX2 485 aaPredicted RBP15.08■□□□□ 0
CPSF1-211ENST00000533492 LNPEPQ9UIQ6 1025 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 RARRES3Q9UL19 164 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 RPS6KL1Q9Y6S9 549 aa15.08■□□□□ 0
CPSF1-211ENST00000533492 C17orf113A0A1B0GUU1 675 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 OR6C74A6NCV1 312 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 OR5K3A6NET4 321 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 H7C0S8 307 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 SGTAO43765 313 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 KRT86O43790 486 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 SLC28A2O43868 658 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 SPAG6O75602 509 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 AP2A1O95782 977 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 GAS8O95995 478 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 FGF5P12034 268 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 TCN2P20062 427 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 ACRV1P26436 265 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 STAT5AP42229 794 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 CCR10P46092 362 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 LMAN1P49257 510 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 CDKN1CP49918 316 aaPredicted RBP15.07■□□□□ 0
CPSF1-211ENST00000533492 ACY1Q03154 408 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 PRKAA1Q13131 559 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.07■□□□□ 0
CPSF1-211ENST00000533492 CAPRIN2Q6IMN6 1127 aaKnown RBP15.07■□□□□ 0
CPSF1-211ENST00000533492 C16orf46Q6P387 395 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 PRICKLE2Q7Z3G6 844 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 LILRA3Q8N6C8 439 aaPredicted RBP15.07■□□□□ 0
CPSF1-211ENST00000533492 DNAAF3Q8N9W5 541 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 GALNT6Q8NCL4 622 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 UBE2Q2Q8WVN8 375 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 STARD8Q92502 1023 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 CDKN2AIPNLQ96HQ2 116 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 FERD3LQ96RJ6 166 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 KIR3DX1Q9H7L2 352 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 PIH1D1Q9NWS0 290 aaKnown RBP15.07■□□□□ 0
CPSF1-211ENST00000533492 GEMIN8Q9NWZ8 242 aaKnown RBP15.07■□□□□ 0
CPSF1-211ENST00000533492 SEMA5BQ9P283 1151 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 IL17BQ9UHF5 180 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 SLC24A2Q9UI40 661 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 PCDHB3Q9Y5E6 796 aa15.07■□□□□ 0
CPSF1-211ENST00000533492 TLCD2A6NGC4 264 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 IFRD1O00458 451 aaPredicted RBP15.06■□□□□ 0
CPSF1-211ENST00000533492 IFNB1P01574 187 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 MT-ND3P03897 115 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 DLSTP36957 453 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 GSDMDP57764 484 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 CACNG1Q06432 222 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 TUBB3Q13509 450 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 SKIDA1Q1XH10 827 aa15.06■□□□□ 0
CPSF1-211ENST00000533492 BPHLQ86WA6 291 aaPredicted RBP15.06■□□□□ 0
CPSF1-211ENST00000533492 KMT5CQ86Y97 462 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms