RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR13J1Q8NGT2 312 aa29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 JPH3Q8WXH2 748 aaPredicted RBP29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 VPS37BQ9H9H4 285 aa29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 OR51F1A6NGY5 319 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 FOXN2P32314 431 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 KCNJ1P48048 391 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 RHDQ02161 417 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 SRSF6Q13247 344 aaKnown RBP29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 GSE1Q14687 1217 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 PLCL1Q15111 1095 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 CAPRIN2Q6IMN6 1127 aaKnown RBP29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 IRGCQ6NXR0 463 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 DUS1LQ6P1R4 473 aaKnown RBP29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 KLHL35Q6PF15 583 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 CEACAM20Q6UY09 585 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 CLDN19Q8N6F1 224 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 ZFPM2Q8WW38 1151 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 RMDN2Q96LZ7 410 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 CTRCQ99895 268 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 ZPBPQ9BS86 351 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 EIF2B3Q9NR50 452 aaKnown RBP29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 SMARCAL1Q9NZC9 954 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 SLC2A6Q9UGQ3 507 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 JRKLQ9Y4A0 524 aa29.59■■■□□ 2.33
SSSCA1-207ENST00000533115 ATXN7O15265 892 aaPredicted RBP29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 RASSF9O75901 435 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 AP2A2O94973 939 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 ITIH4Q14624 930 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 ZNF658BQ4V348 819 aaPredicted RBP29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 NLRP9Q7RTR0 991 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 PRSS42Q7Z5A4 293 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 VASH2Q86V25 355 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 HDAC10Q969S8 669 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 ZNF768Q9H5H4 540 aaKnown RBP29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 COG4Q9H9E3 785 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 APMAPQ9HDC9 416 aa29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 SIDT1Q9NXL6 827 aaKnown RBP29.58■■■□□ 2.33
SSSCA1-207ENST00000533115 KIF1CO43896 1103 aaKnown RBP29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 NSG1P42857 185 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 SEPHS1P49903 392 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 BASP1P80723 227 aaKnown RBP29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 CACHD1Q5VU97 1274 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 FAM92BQ6ZTR7 304 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 PRELID2Q8N945 189 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 NKD1Q969G9 470 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 ZNF778Q96MU6 729 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 KIR3DX1Q9H7L2 352 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 TCAF1Q9Y4C2 921 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 HEBP2Q9Y5Z4 205 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 COLEC10Q9Y6Z7 277 aa29.57■■■□□ 2.32
SSSCA1-207ENST00000533115 ERVH48-1M5A8F1 160 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 POLR1CO15160 346 aaPredicted RBP29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 GOT2P00505 430 aaKnown RBP29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 GSTM1P09488 218 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 ATP1A2P50993 1020 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 GSTM4Q03013 218 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 ACVR1Q04771 509 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 AFTPHQ6ULP2 937 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 PACS1Q6VY07 963 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 LSM14AQ8ND56 463 aaKnown RBP29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 PPHLN1Q8NEY8 458 aaKnown RBP29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 TBRG4Q969Z0 631 aaKnown RBP eCLIP29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 SLC24A2Q9UI40 661 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 PRSS21Q9Y6M0 314 aa29.56■■■□□ 2.32
SSSCA1-207ENST00000533115 QSOX1O00391 747 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 PPP1CAP62136 330 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 KRT33BQ14525 404 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 LYPLAL1Q5VWZ2 237 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 REXO1L1PQ8IX06 675 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 RASGEF1CQ8N431 466 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 KLHL6Q8WZ60 621 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 PEX13Q92968 403 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 PBKQ96KB5 322 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 SPRY4Q9C004 299 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 OR52A5Q9H2C5 316 aa29.55■■■□□ 2.32
SSSCA1-207ENST00000533115 OR5K3A6NET4 321 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 EIF4E1BA6NMX2 242 aaKnown RBP29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 NDUFS1P28331 727 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 SESN2P58004 480 aaPredicted RBP29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 FOXM1Q08050 763 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 RPA4Q13156 261 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 PCID2Q5JVF3 399 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 ZNF449Q6P9G9 518 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 OR6P1Q8NGX9 317 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 OR4L1Q8NH43 312 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 TTC1Q99614 292 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 PILRAQ9UKJ1 303 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 PIKFYVEQ9Y2I7 2098 aa29.54■■■□□ 2.32
SSSCA1-207ENST00000533115 TK2O00142 265 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 IFRD1O00458 451 aaPredicted RBP29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 RAD1O60671 282 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 PDHA2P29803 388 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 CD151P48509 253 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 KIAA1614Q5VZ46 1190 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 PCSK4Q6UW60 755 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 OOSP2Q86WS3 158 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 CACNA2D3Q8IZS8 1091 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 IL22RA1Q8N6P7 574 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 SLC39A7Q92504 469 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 SGSM3Q96HU1 749 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms