RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TLR1Q15399 786 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 LPAL2Q16609 132 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 ZNF658BQ4V348 819 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 FBXO38Q6PIJ6 1188 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 CLDN19Q8N6F1 224 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 UHMK1Q8TAS1 419 aaKnown RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 GPBAR1Q8TDU6 330 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 TSACCQ96A04 125 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 ISL2Q96A47 359 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 TSPAN17Q96FV3 270 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 VIPAS39Q9H9C1 493 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 EURLQ9NYK6 297 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 PSMC3IPQ9P2W1 217 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 ZNHIT2Q9UHR6 403 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 VWA7Q9Y334 891 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 CSNK1G3Q9Y6M4 447 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 IQANK1A0A1B0GTG1 560 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 A0A1B0GTQ1 180 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 FAM95CA0A1B0GW59 222 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 A6NJY4 79 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 E5RI56 91 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 POP7O75817 140 aaKnown RBP12.28□□□□□ -0.44
COPB1-208ENST00000532088 KRT37O76014 449 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 CFIP05156 583 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
COPB1-208ENST00000532088 ZNF883P0CG24 379 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 CBSLP0DN79 551 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 FDXRP22570 491 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ATP5DP30049 168 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 CBSP35520 551 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ARHGAP8P85298 464 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 IFFO1Q0D2I5 559 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ILF3Q12906 894 aaKnown RBP eCLIP12.28□□□□□ -0.44
COPB1-208ENST00000532088 CASP8Q14790 479 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 TMED2Q15363 201 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ELOCQ15369 112 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ZKSCAN8Q15776 578 aaPredicted RBP12.28□□□□□ -0.44
COPB1-208ENST00000532088 TTLL9Q3SXZ7 439 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 PLEKHS1Q5SXH7 462 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 HECTD2Q5U5R9 776 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 LVRNQ6Q4G3 990 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 TIFABQ6ZNK6 161 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 HDXQ7Z353 690 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 HID1Q8IV36 788 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 PNPLA1Q8N8W4 532 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ASZ1Q8WWH4 475 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 GSDMCQ9BYG8 508 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
COPB1-208ENST00000532088 WASH6PQ9NQA3 447 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 DNAJC28Q9NX36 388 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 KLF15Q9UIH9 416 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 PCOLCE2Q9UKZ9 415 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 ACSL5Q9ULC5 683 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
COPB1-208ENST00000532088 PLAAQ9Y263 795 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 MED16Q9Y2X0 877 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 DHRS7Q9Y394 339 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
COPB1-208ENST00000532088 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 FIGNL2A6NMB9 653 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 RASGRF2O14827 1237 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 GPC4O75487 556 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 PIAS1O75925 651 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 PIAS2O75928 621 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 FAM155BO75949 473 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 APOA4P06727 396 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 ENO3P13929 434 aaPredicted RBP12.27□□□□□ -0.45
COPB1-208ENST00000532088 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.45
COPB1-208ENST00000532088 CHRM3P20309 590 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 AOAHP28039 575 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CRABP2P29373 138 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 SLC26A3P40879 764 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 MAPK9P45984 424 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CSRP3P50461 194 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CLCN7P51798 805 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 GBX1Q14549 363 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CSRP2Q16527 193 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 INSCQ1MX18 579 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 HLA-BQ31612 363 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 RBM20Q5T481 1227 aaKnown RBP12.27□□□□□ -0.45
COPB1-208ENST00000532088 AGAP9Q5VTM2 703 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 METRNLQ641Q3 311 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CRTC3Q6UUV7 619 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 NEK10Q6ZWH5 1172 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 CHST15Q7LFX5 561 aaPredicted RBP12.27□□□□□ -0.45
COPB1-208ENST00000532088 OTOAQ7RTW8 1153 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 GKN2Q86XP6 184 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 BEND7Q8N7W2 519 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms