RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 HMMRO75330 724 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 ZSCAN5DPP0CG00 497 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 PPM1FP49593 454 aaPredicted RBP3.64□□□□□ -1.83
PTPRK-220ENST00000531466 ELAVL2Q12926 359 aaKnown RBP3.64□□□□□ -1.83
PTPRK-220ENST00000531466 KCTD2Q14681 263 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 TAF3Q5VWG9 929 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 CRYBG2Q8N1P7 616 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 GCSAMQ8N6F7 178 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 PSPC1Q8WXF1 523 aaKnown RBP3.64□□□□□ -1.83
PTPRK-220ENST00000531466 RASL10AQ92737 203 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 TMEM68Q96MH6 324 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 GPR63Q9BZJ6 419 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 SEMA6AQ9H2E6 1030 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 ERAP1Q9NZ08 941 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 NUDT4Q9NZJ9 180 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 ABI3Q9P2A4 366 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 DGKBQ9Y6T7 804 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 CROCCQ5TZA2 2017 aa3.64□□□□□ -1.83
PTPRK-220ENST00000531466 TSPAN4O14817 238 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ATP2A1O14983 1001 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 NPHP1O15259 732 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 JRKO75564 520 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 GCNT3O95395 438 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ACADMP11310 421 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ABCD1P33897 745 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 CTCFP49711 727 aaPredicted RBP3.63□□□□□ -1.83
PTPRK-220ENST00000531466 CALD1Q05682 793 aaKnown RBP3.63□□□□□ -1.83
PTPRK-220ENST00000531466 GPR17Q13304 367 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 E2F5Q15329 346 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ZKSCAN8Q15776 578 aaPredicted RBP3.63□□□□□ -1.83
PTPRK-220ENST00000531466 LDHAL6AQ6ZMR3 332 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ZSCAN30Q86W11 494 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ZNF354CQ86Y25 554 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 SLC34A3Q8N130 599 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 HERVK_113Q902F9 699 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 SUSD6Q92537 303 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 MYCBPQ99417 103 aaPredicted RBP3.63□□□□□ -1.83
PTPRK-220ENST00000531466 TAB2Q9NYJ8 693 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ZDHHC2Q9UIJ5 367 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 MKLN1Q9UL63 735 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 ODF2LQ9ULJ1 636 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 PCDHGB3Q9Y5G1 929 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 CAPN7Q9Y6W3 813 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 MAU2Q9Y6X3 613 aa3.63□□□□□ -1.83
PTPRK-220ENST00000531466 KANSL1LA0AUZ9 987 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 KPNA7A9QM74 516 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 ICAM1P05362 532 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 CASP2P42575 452 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 GALNT2Q10471 571 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 PPFIA1Q13136 1202 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 OLIG2Q13516 323 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 CDC37Q16543 378 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 CCDC92Q53HC0 331 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 TSSK4Q6SA08 328 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 DENND5BQ6ZUT9 1274 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 DCLK2Q8N568 766 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 CCDC89Q8N998 374 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 KBTBD8Q8NFY9 601 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 APOPT1Q96IL0 206 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 NSMCE3Q96MG7 304 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 PRKRIP1Q9H875 184 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 ABCB10Q9NRK6 738 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 RBM28Q9NW13 759 aaKnown RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 CWC25Q9NXE8 425 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 RAI14Q9P0K7 980 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 ZNF69Q9UC07 566 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 SARDHQ9UL12 918 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 SLC7A7Q9UM01 511 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 GTF2A1LQ9UNN4 478 aa3.62□□□□□ -1.83
PTPRK-220ENST00000531466 TDRD15B5MCY1 1934 aaKnown RBP3.62□□□□□ -1.83
PTPRK-220ENST00000531466 EPM2AB3EWF7 344 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 SOCS3O14543 225 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 ZBTB43O43298 467 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 BCL2L11O43521 198 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 PLPP2O43688 288 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 TNNT2P45379 298 aaPredicted RBP3.61□□□□□ -1.83
PTPRK-220ENST00000531466 BIRC3Q13489 604 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 RNF212Q495C1 297 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 HSP90B2PQ58FF3 399 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 ANKRD18AQ8IVF6 992 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 GPALPP1Q8IXQ4 340 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 HPSE2Q8WWQ2 592 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 TRIM63Q969Q1 353 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 GCC1Q96CN9 775 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 CFAP53Q96M91 514 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 PAIP2Q9BPZ3 127 aaKnown RBP3.61□□□□□ -1.83
PTPRK-220ENST00000531466 MAGIXQ9H6Y5 334 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 MBNL1Q9NR56 388 aaKnown RBP3.61□□□□□ -1.83
PTPRK-220ENST00000531466 OLFML3Q9NRN5 406 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 FLRT3Q9NZU0 649 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 UBA2Q9UBT2 640 aaPredicted RBP3.61□□□□□ -1.83
PTPRK-220ENST00000531466 CAMK2AQ9UQM7 478 aa3.61□□□□□ -1.83
PTPRK-220ENST00000531466 NXPH2O95156 264 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 IGHV3-13P01766 116 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 LDHCP07864 332 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 HRH2P25021 359 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 PRCPP42785 496 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 MAGEA11P43364 429 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 MAP2K1Q02750 393 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms