RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ARHGEF33A8MVX0 844 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 LOC110117498-PIK3R3F6TDL0 507 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 PAPSS2O95340 614 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ZBTB11O95625 1053 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 GPIP06744 558 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ALPPL2P10696 532 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 STARP49675 285 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 RABGGTBP53611 331 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 CHIT1Q13231 466 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 C6orf52Q5T4I8 152 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ESRP1Q6NXG1 681 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF781Q8N8C0 355 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FAR1Q8WVX9 515 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 PPM1MQ96MI6 270 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 TFB2MQ9H5Q4 396 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ING3Q9NXR8 418 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 EIF2B4Q9UI10 523 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FADS3Q9Y5Q0 445 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 IQCMA0A1B0GVH7 501 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 A8MUI8 341 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 UBXN7O94888 489 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 OR4F21O95013 312 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 AQP1P29972 269 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 GRB14Q14449 540 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 VWA5B1Q5TIE3 1220 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 POMZP3Q6PJE2 187 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 OTOP2Q7RTS6 562 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FAM47BQ8NA70 645 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 FAM81AQ8TBF8 368 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 XAGE5Q8WWM1 108 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 RIT1Q92963 219 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 RNF31Q96EP0 1072 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 C12orf42Q96LP6 360 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 TRNT1Q96Q11 434 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 GPATCH1Q9BRR8 931 aaKnown RBP8.37□□□□□ -1.07
CTNND1-227ENST00000530748 NMUR2Q9GZQ4 415 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 ATG10Q9H0Y0 220 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 U3KQV3 271 aa8.37□□□□□ -1.07
CTNND1-227ENST00000530748 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ADAMDEC1O15204 470 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SLC7A4O43246 635 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 RAB25P57735 213 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 RAB2AP61019 212 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF460Q14592 562 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SLC5A9Q2M3M2 681 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 BICRALQ6AI39 1079 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ABHD13Q7L211 337 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 CYP2U1Q7Z449 544 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 KBTBD2Q8IY47 623 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 RBM15BQ8NDT2 890 aaKnown RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 KBTBD7Q8WVZ9 684 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 LPGAT1Q92604 370 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 BORCS5Q969J3 196 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ZNF347Q96SE7 839 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 TAPBPLQ9BX59 468 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 FZD8Q9H461 694 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SIX2Q9NPC8 291 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SMPD3Q9NY59 655 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 CNTN3Q9P232 1028 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ABI3Q9P2A4 366 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 CIDEBQ9UHD4 219 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 PCDHGC4Q9Y5F7 938 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 PEAK1Q9H792 1746 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 TAF4O00268 1085 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 CXCR6O00574 342 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 IRAK2O43187 625 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 PLOD3O60568 738 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 KERAO60938 352 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 KCNA5P22460 613 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ILF3Q12906 894 aaKnown RBP eCLIP8.36□□□□□ -1.072e-7■■□□□ 13.8
CTNND1-227ENST00000530748 DPYSL2Q16555 572 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ECHDC2Q86YB7 292 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 DAW1Q8N136 415 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 MPP5Q8N3R9 675 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 HDDC3Q8N4P3 179 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 GIPC3Q8TF64 312 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 RFKQ969G6 155 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SLC38A4Q969I6 547 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 TTYH3Q9C0H2 523 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SMURF2Q9HAU4 748 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ABCB8Q9NUT2 735 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 NDRG2Q9UN36 371 aaKnown RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 TLL2Q9Y6L7 1015 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 TRBV23OR9-2A0A075B6M9 112 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ABLIM1O14639 778 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 PMM2O15305 246 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 MTRF1O75570 445 aaKnown RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 SERPINA1P01009 418 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 UNGP13051 313 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 CCT3P49368 545 aaKnown RBP8.36□□□□□ -1.07
CTNND1-227ENST00000530748 ARHGDIBP52566 201 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 GDF10P55107 478 aa8.36□□□□□ -1.07
CTNND1-227ENST00000530748 RGS8P57771 180 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms