RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 GTF2H3Q13889 308 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 PCSK7Q16549 785 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 ZXDCQ2QGD7 858 aaPredicted RBP18.45■□□□□ 0.54
SSRP1-204ENST00000529002 DCAF10Q5QP82 559 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 ZADH2Q8N4Q0 377 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 BEND7Q8N7W2 519 aaPredicted RBP18.45■□□□□ 0.54
SSRP1-204ENST00000529002 GRHL3Q8TE85 626 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 TSGA13Q96PP4 275 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 WWP1Q9H0M0 922 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 AGPAT4Q9NRZ5 378 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 FAM8A1Q9UBU6 413 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 SCINQ9Y6U3 715 aa18.45■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A9O60656 530 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 ALOX12BO75342 701 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 CBSLP0DN79 551 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A6P19224 532 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 CYP2A7P20853 494 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 CDH3P22223 829 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A1P22309 533 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A4P22310 534 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 CBSP35520 551 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 LMAN1P49257 510 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 ARSEP51690 589 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 XRCC4Q13426 336 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 DPYSL3Q14195 570 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 MLIPQ5VWP3 458 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 ZNF385CQ66K41 422 aaPredicted RBP18.44■□□□□ 0.54
SSRP1-204ENST00000529002 ARMC6Q6NXE6 501 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 PPP1R2P3Q6NXS1 205 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 TMEM220Q6QAJ8 160 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A7Q9HAW7 530 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A10Q9HAW8 530 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 UGT1A8Q9HAW9 530 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 MAGEE1Q9HCI5 957 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
SSRP1-204ENST00000529002 SLC24A2Q9UI40 661 aa18.44■□□□□ 0.54
SSRP1-204ENST00000529002 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 ZNF749O43361 778 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 ALPPP05187 535 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 CCDC172P0C7W6 258 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 PVRP15151 417 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 ST6GAL1P15907 406 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 DMPKQ09013 629 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 NOMO1Q15155 1222 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 APTXQ7Z2E3 356 aaKnown RBP18.43■□□□□ 0.54
SSRP1-204ENST00000529002 CLEC1AQ8NC01 280 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 CCNYQ8ND76 341 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 OR4E2Q8NGC2 313 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 FAM71BQ8TC56 605 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 LURAP1Q96LR2 239 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 C12orf66Q96MD2 445 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 VPS35Q96QK1 796 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 SLC7A5P2Q9GIP4 190 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 FANCEQ9HB96 536 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 RAD18Q9NS91 495 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 P4HTMQ9NXG6 502 aa18.43■□□□□ 0.54
SSRP1-204ENST00000529002 NOVA2Q9UNW9 492 aaKnown RBP18.43■□□□□ 0.54
SSRP1-204ENST00000529002 PTRH2Q9Y3E5 179 aaKnown RBP18.43■□□□□ 0.54
SSRP1-204ENST00000529002 C9J4A7 227 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 CNOT3O75175 753 aaKnown RBP18.42■□□□□ 0.54
SSRP1-204ENST00000529002 GZMAP12544 262 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 SKILP12757 684 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 SSR1P43307 286 aaKnown RBP18.42■□□□□ 0.54
SSRP1-204ENST00000529002 PREPP48147 710 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 SLC9A5Q14940 896 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 ZFYVE27Q5T4F4 411 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 C1orf189Q5VU69 101 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 PQLC3Q8N755 202 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 FATE1Q969F0 183 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 FER1L6-AS2Q96M78 137 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 TTC25Q96NG3 672 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 TRAPPC9Q96Q05 1148 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 NUP62CLQ9H1M0 184 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 MRPL47Q9HD33 250 aaKnown RBP18.42■□□□□ 0.54
SSRP1-204ENST00000529002 COPG2Q9UBF2 871 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 POMT2Q9UKY4 750 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 MTORP42345 2549 aa18.42■□□□□ 0.54
SSRP1-204ENST00000529002 PIGHQ14442 188 aaPredicted RBP18.41■□□□□ 0.54
SSRP1-204ENST00000529002 SSPNQ14714 243 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 ASIC2Q16515 512 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
SSRP1-204ENST00000529002 CCDC183Q5T5S1 534 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 B4GALNT4Q76KP1 1039 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 DET1Q7L5Y6 550 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 PPP1R32Q7Z5V6 425 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 LILRA3Q8N6C8 439 aaPredicted RBP18.41■□□□□ 0.54
SSRP1-204ENST00000529002 WDR77Q9BQA1 342 aaPredicted RBP18.41■□□□□ 0.54
SSRP1-204ENST00000529002 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 PADI2Q9Y2J8 665 aa18.41■□□□□ 0.54
SSRP1-204ENST00000529002 CCDC78A2IDD5 438 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 PEX12O00623 359 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 HCRTR1O43613 425 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 MT-CYBP00156 380 aaPredicted RBP18.4■□□□□ 0.54
SSRP1-204ENST00000529002 HLA-DPA1P20036 260 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 METRNLQ641Q3 311 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 NT5DC3Q86UY8 548 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 SPATA22Q8NHS9 363 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 FAR1Q8WVX9 515 aa18.4■□□□□ 0.54
SSRP1-204ENST00000529002 RMDN2Q96LZ7 410 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms