RNA–Protein interactions for RNA: ENST00000528642.5

ZCCHC11-220, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 5

Gene ZCCHC11, Length 3,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-220ENST00000528642 MSH3P20585 1137 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 HOXA11P31270 313 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 S100A3P33764 101 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 LHX1P48742 406 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ZDHHC21Q8IVQ6 265 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 OR13F1Q8NGS4 319 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 LGALS12Q96DT0 336 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TMEM209Q96SK2 561 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TP63Q9H3D4 680 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 SLC1A7O00341 560 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ULK1O75385 1050 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 FYNP06241 537 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ALOX5P09917 674 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 CDH1P12830 882 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 OTULINQ96BN8 352 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 CSF3RQ99062 836 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TTYH2Q9BSA4 534 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TUBB1Q9H4B7 451 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ZBTB20Q9HC78 741 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ABCB9Q9NP78 766 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ERVK13-1Q9NX77 482 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 NRCAMQ92823 1304 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 DNAJB13P59910 316 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 EMX1Q04741 257 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 INAVAQ3KP66 663 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.54□□□□□ -0.44e-9■■■■□ 20.4
ZCCHC11-220ENST00000528642 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 ZNF598Q86UK7 904 aaKnown RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 CLDN19Q8N6F1 224 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 AMER2Q8N7J2 671 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 NMRK2Q9NPI5 230 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 SCN1AP35498 2009 aa12.54□□□□□ -0.4
ZCCHC11-220ENST00000528642 M0R129 80 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 MAFKO60675 156 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 S1PR4O95977 384 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 UMPSP11172 480 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 BMP4P12644 408 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 CD1DP15813 335 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ACVRL1P37023 503 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 SOWAHCQ53LP3 525 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 LIX1Q8N485 282 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TMEM199Q8N511 208 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 VAPAQ9P0L0 249 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 OAS3Q9Y6K5 1087 aaKnown RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 CSF2P04141 144 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 PIM1P11309 404 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 DNAJB2P25686 324 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 GRK4P32298 578 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 OR1G1P47890 313 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 MTA1Q13330 715 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ALFQ53S48 1182 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 NEK6Q9HC98 313 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 DNAJB9Q9UBS3 223 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TMED5Q9Y3A6 229 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 VIPP01282 170 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 HSD17B1P14061 328 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 MC4RP32245 332 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 MAGEA12P43365 314 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 RFTN2Q52LD8 501 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ZNF648Q5T619 568 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 Q6ZPB1 254 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 ARRDC4Q8NCT1 418 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 SLC13A3Q8WWT9 602 aa12.53□□□□□ -0.4
ZCCHC11-220ENST00000528642 TANKQ92844 425 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms