RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SPC24Q8NBT2 197 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 ZNF540Q8NDQ6 660 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 SPATA22Q8NHS9 363 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 UTP15Q8TED0 518 aaKnown RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 GIMAP1Q8WWP7 306 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 APBB2Q92870 758 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 PTP4A1Q93096 173 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 FAM84BQ96KN1 310 aaPredicted RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 LMLNQ96KR4 655 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 MTERF1Q99551 399 aaKnown RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 SPRY4Q9C004 299 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 FTOQ9C0B1 505 aaKnown RBP eCLIP5.71□□□□□ -1.5
PCF11-202ENST00000528336 EIF2B3Q9NR50 452 aaKnown RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 INTS10Q9NVR2 710 aaKnown RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 RABL2AQ9UBK7 228 aaPredicted RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 VDAC3Q9Y277 283 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 ZNF142P52746 1687 aaPredicted RBP5.71□□□□□ -1.5
PCF11-202ENST00000528336 TAF1P21675 1872 aa5.71□□□□□ -1.5
PCF11-202ENST00000528336 PIK3C2BO00750 1634 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 IPO8O15397 1037 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 SOCS5O75159 536 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 TBX10O75333 385 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 JRKO75564 520 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 EEF2P13639 858 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 HOXB6P17509 224 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 TNNT2P45379 298 aaPredicted RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 ZNF41P51814 821 aaPredicted RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 PPP5CP53041 499 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 GALCP54803 685 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 PDE1BQ01064 536 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 SLC20A2Q08357 652 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 TMEM266Q2M3C6 531 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 IRGCQ6NXR0 463 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 KLHL35Q6PF15 583 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 CACNA2D4Q7Z3S7 1137 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 SATL1Q86VE3 508 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 ODF3L1Q8IXM7 274 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 THNSL1Q8IYQ7 743 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 DCP1BQ8IZD4 617 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 SRBD1Q8N5C6 995 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 PCDH20Q8N6Y1 951 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 ZNF441Q8N8Z8 693 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 GSDMBQ8TAX9 411 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 MAGEC3Q8TD91 643 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 FIG4Q92562 907 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 USP6NLQ92738 828 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 RHBDF1Q96CC6 855 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 C1orf74Q96LT6 269 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 CCDC43Q96MW1 224 aaKnown RBP5.7□□□□□ -1.5
PCF11-202ENST00000528336 CMTM3Q96MX0 182 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 FNBP1Q96RU3 617 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 PCYT2Q99447 389 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 MUC13Q9H3R2 512 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 PDZD7Q9H5P4 517 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 KAT14Q9H8E8 782 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 LRRC4Q9HBW1 653 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 PCDH9Q9HC56 1237 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 ADPRHL2Q9NX46 363 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 MCM9Q9NXL9 1143 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 SH3BGRL2Q9UJC5 107 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 UGGT1Q9NYU2 1555 aa5.7□□□□□ -1.5
PCF11-202ENST00000528336 ADGRB3O60242 1522 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 DHX57Q6P158 1386 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 ANKRD30BQ9BXX2 1392 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 SPHKAPQ2M3C7 1700 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 CCDC144AA2RUR9 1427 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 GOLGA6L9A6NEM1 432 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 A8MXE2 369 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 FAM25EA8MYX2 175 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 MYO1GB0I1T2 1018 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 DDX39AO00148 427 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 SPINT2O43291 252 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 NDUFS3O75489 264 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 ATP5BP06576 529 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 TMPOP42166 694 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 HSPA2P54652 639 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 ZNF674Q2M3X9 581 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 ANKDD1AQ495B1 522 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 LRIF1Q5T3J3 769 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 GKAP1Q5VSY0 366 aaPredicted RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 IYDQ6PHW0 289 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 OTUD6AQ7L8S5 288 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 SFR1Q86XK3 245 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 TBC1D21Q8IYX1 336 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 SPATA20Q8TB22 786 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 POMGNT1Q8WZA1 660 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 CALML4Q96GE6 196 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 IL17FQ96PD4 163 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 DNAI2Q9GZS0 605 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 SEPT11Q9NVA2 429 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 OR14J1Q9UGF5 321 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 CHORDC1Q9UHD1 332 aaPredicted RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 MTMR6Q9Y217 621 aa5.69□□□□□ -1.5
PCF11-202ENST00000528336 KDM5AP29375 1690 aaKnown RBP5.69□□□□□ -1.5
PCF11-202ENST00000528336 TMEM2Q9UHN6 1383 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 CLTCL1P53675 1640 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 ZNF587BE7ETH6 402 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 M0QZ24 198 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms