RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 ENDOUP21128 410 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 TRPC1P48995 793 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 RPS3AP61247 264 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 ATP6V0D1P61421 351 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 NFKB2Q00653 900 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 CDKN3Q16667 212 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 OGFRL1Q5TC84 451 aaPredicted RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 EGFLAMQ63HQ2 1017 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 CLEC6AQ6EIG7 209 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 GET4Q7L5D6 327 aaPredicted RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 ZBTB46Q86UZ6 589 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 PEX5LQ8IYB4 626 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 NKAPQ8N5F7 415 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 CLDN19Q8N6F1 224 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 C12orf76Q8N812 135 aaPredicted RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 CHST14Q8NCH0 376 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 ITFG1Q8TB96 612 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 CD200R1Q8TD46 325 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 SORCS1Q8WY21 1168 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 KCNJ9Q92806 393 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.12□□□□□ -1.11
SOX6-210ENST00000528252 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 ZNF707Q96C28 371 aaPredicted RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 L3HYPDHQ96EM0 354 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 PLEKHA8Q96JA3 519 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 NSUN5Q96P11 429 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 TRMOQ9BU70 441 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 BOCQ9BWV1 1114 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 MTIF3Q9H2K0 278 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 TBC1D14Q9P2M4 693 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
SOX6-210ENST00000528252 SLC25A13Q9UJS0 675 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 C5orf42Q9H799 3197 aa8.12□□□□□ -1.11
SOX6-210ENST00000528252 NPEPPSL1A6NEC2 478 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NCF1BA6NI72 391 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NCF1CA8MVU1 366 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 C5orf67F2Z3F1 127 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CASQ2O14958 399 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 PEX1O43933 1283 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 KERAO60938 352 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ECI2O75521 394 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 POP4O95707 220 aaKnown RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 TSPAN12O95859 305 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 MYCLP1P12525 358 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 COX4I1P13073 169 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NCF1P14598 390 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 IL2P60568 153 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CDKL1Q00532 357 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NFATC2Q13469 925 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 SF3B4Q15427 424 aaKnown RBP eCLIP8.11□□□□□ -1.11
SOX6-210ENST00000528252 CHRNA6Q15825 494 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CYP2A13Q16696 494 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CARD16Q5EG05 197 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 LRRC73Q5JTD7 316 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NIPAL1Q6NVV3 410 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CRTC1Q6UUV9 634 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CERS6Q6ZMG9 384 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 RAB44Q7Z6P3 723 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 ADIPOR2Q86V24 386 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 SIX5Q8N196 739 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 STK40Q8N2I9 435 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 LEMD2Q8NC56 503 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ANKK1Q8NFD2 765 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 FUBP1Q96AE4 644 aaKnown RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 LINGO1Q96FE5 620 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 SCRN2Q96FV2 425 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 MAELQ96JY0 434 aaKnown RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 LRRC3BQ96PB8 259 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 P2RY12Q9H244 342 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 C1orf21Q9H246 121 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 Q9H521 79 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CERS4Q9HA82 394 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 NOTCH4Q99466 2003 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 GLYATL1P3A0A0U1RQE8 302 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 A6NL46 340 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 A8MU76 341 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 J3QRK9 145 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 AQP9O43315 295 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CDK14O94921 469 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 RB1P06400 928 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ZNF12P17014 697 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ZNF7P17097 686 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 ITGB6P18564 788 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 ITGALP20701 1170 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 PIK3R1P27986 724 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 C21orf59P57076 290 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 SH3BP2P78314 561 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 CTBSQ01459 385 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 GALNT1Q10472 559 aaPredicted RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 KCNJ8Q15842 424 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 GEN1Q17RS7 908 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 PTRHD1Q6GMV3 140 aaKnown RBP8.11□□□□□ -1.11
SOX6-210ENST00000528252 XKR5Q6UX68 686 aa8.11□□□□□ -1.11
SOX6-210ENST00000528252 TMC5Q6UXY8 1006 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms