RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ZFP37Q9Y6Q3 630 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 CLUHO75153 1309 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 SPTBP11277 2137 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TMEM131Q92545 1883 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 LRP4O75096 1905 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 A0A0D9SEW6 157 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 CCDC195A0A1B0GUA6 201 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 ARHGAP42A6NI28 874 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 C2orf81A6NN90 581 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 E7ESA3 106 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 E7EVH7 732 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 LEFTY2O00292 366 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TOR1BO14657 336 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 NDC80O14777 642 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 ALOX15BO15296 676 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RIPK2O43353 540 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RAMP2O60895 175 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TBL1XO60907 577 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 USP12O75317 370 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TIPRLO75663 272 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 PIAS1O75925 651 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 NEBLO76041 1014 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 INMTO95050 263 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 PRAMEF12O95522 483 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CNOT4O95628 575 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 TTC4O95801 387 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 OLFM2O95897 454 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 PEX11BO96011 259 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HPXP02790 462 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HLA-DQB2P05538 268 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RHOCP08134 193 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CCNB1P14635 433 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TPSB2P20231 275 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MALP21145 153 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 GLDCP23378 1020 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 SSTR1P30872 391 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 OR1E1P30953 314 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 ELK3P41970 407 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 STAT5AP42229 794 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MAGEA6P43360 314 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 SLCO1A2P46721 670 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 NRIP1P48552 1158 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MAPKAPK2P49137 400 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 GALK1P51570 392 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HSD17B7P56937 341 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 SESN2P58004 480 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 GPX6P59796 221 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MAXP61244 160 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 IL13RA1P78552 427 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CRADDP78560 199 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 IFI35P80217 286 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 SLC7A9P82251 487 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CBX1P83916 185 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MEF2AQ02078 507 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 TLE1Q04724 770 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 ZNF844Q08AG5 666 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 IFFO1Q0D2I5 559 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 GPS2Q13227 327 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 PRKG2Q13237 762 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RAB39AQ14964 217 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 EFTUD2Q15029 972 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD44-226ENST00000527889 TPSAB1Q15661 275 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RAB30Q15771 203 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 SMAD1Q15797 465 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 PFKFB4Q16877 469 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CR1LQ2VPA4 569 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 C5orf22Q49AR2 442 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TEX44Q53QW1 395 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 ARHGAP15Q53QZ3 475 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RABGAP1LQ5R372 815 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 RARS2Q5T160 578 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 ADGRF1Q5T601 910 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 INTS11Q5TA45 600 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 KCTD16Q68DU8 428 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 FAM180AQ6UWF9 173 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 LRIG3Q6UXM1 1119 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TMC5Q6UXY8 1006 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 C4orf22Q6V702 233 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CENPUQ71F23 418 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CBLL1Q75N03 491 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 ZNF534Q76KX8 674 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TRMT10CQ7L0Y3 403 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 DGLUCYQ7Z3D6 616 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CAND1Q86VP6 1230 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 BBS7Q8IWZ6 715 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 PDIK1LQ8N165 341 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 MPP5Q8N3R9 675 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 CARNMT1Q8N4J0 409 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 TDRD5Q8NAT2 981 aaKnown RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 ATP11CQ8NB49 1132 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 HJURPQ8NCD3 748 aaPredicted RBP4.17□□□□□ -1.74
CD44-226ENST00000527889 MCUQ8NE86 351 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 FBXO36Q8NEA4 188 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 VN1R2Q8NFZ6 395 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 OR8H1Q8NGG4 311 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 OR52K1Q8NGK4 314 aa4.17□□□□□ -1.74
CD44-226ENST00000527889 SPATA22Q8NHS9 363 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms