RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PACRGLQ8N7B6 248 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ZNF689Q96CS4 500 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 C19orf43Q9BQ61 176 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 INTS6Q9UL03 887 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 CROCCQ5TZA2 2017 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 GOLGA8CPA6NN73 597 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ACOX3O15254 700 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 H6PDO95479 791 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 OTCP00480 354 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 NPPAP01160 153 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 S100BP04271 92 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 ENO2P09104 434 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 FASP25445 335 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 SOX11P35716 441 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 NR6A1Q15406 480 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ATP6AP1Q15904 470 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 PLA2G4EQ3MJ16 856 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 HABP4Q5JVS0 413 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 DGKKQ5KSL6 1271 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 TSPAN33Q86UF1 283 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 BBS7Q8IWZ6 715 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 PAPD5Q8NDF8 572 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 ZFP28Q8NHY6 868 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ZNF296Q8WUU4 475 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 ACDQ96AP0 544 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 NMD3Q96D46 503 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 DEFB118Q96PH6 123 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 RPF2Q9H7B2 306 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 RC3H2Q9HBD1 1191 aaKnown RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 GLYATL1P3A0A0U1RQE8 302 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 GRXCR2A6NFK2 248 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 A8MX80 341 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 H3BNH8 94 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 SOCS5O75159 536 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 URODP06132 367 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 HTR1EP28566 365 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 CD70P32970 193 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 GDF5P43026 501 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 RGS4P49798 205 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 OR4D2P58180 307 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 SELPLGQ14242 412 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 KIAA0040Q15053 153 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 AP5B1Q2VPB7 878 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 SPRED1Q7Z699 444 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 HID1Q8IV36 788 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 ZBTB2Q8N680 514 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 PAK6Q9NQU5 681 aaPredicted RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 PNPLA3Q9NST1 481 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 SMOXQ9NWM0 555 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 ZMYM5Q9UJ78 669 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 POLR3HQ9Y535 204 aaPredicted RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 NPIPB15A6NHN6 443 aaPredicted RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 ARNTLO00327 626 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 GNAO1P09471 354 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 DGKAP23743 735 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 DGKQP52824 942 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 NR1H2P55055 460 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 SEMG2Q02383 582 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 FAM117BQ6P1L5 589 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 MILR1Q7Z6M3 343 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 RHBDF1Q96CC6 855 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 MRPL17Q9NRX2 175 aaKnown RBP17.28■□□□□ 0.36
USH1C-205ENST00000527020 OAZ3Q9UMX2 235 aa17.28■□□□□ 0.36
USH1C-205ENST00000527020 TEX28O15482 410 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 GABRR2P28476 465 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 RFC2P35250 354 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 CNKSR3Q6P9H4 555 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 HTR3DQ70Z44 454 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 ADGRG2Q8IZP9 1017 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 FIBCD1Q8N539 461 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 GPR26Q8NDV2 337 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 TSPAN14Q8NG11 270 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 APOL5Q9BWW9 433 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 LRRC3Q9BY71 257 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 CD244Q9BZW8 370 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 PIF1Q9H611 641 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 FARSBQ9NSD9 589 aaKnown RBP17.27■□□□□ 0.36
USH1C-205ENST00000527020 ABCB8Q9NUT2 735 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 CFAP97Q9P2B7 532 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 CRLS1Q9UJA2 301 aa17.27■□□□□ 0.36
USH1C-205ENST00000527020 MKI67P46013 3256 aaKnown RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 DYTNA2CJ06 578 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 JAK1P23458 1154 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 HMOX2P30519 316 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 SPAM1P38567 509 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 PIK3CGP48736 1102 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 TLE2Q04725 743 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 PLEKHG6Q3KR16 790 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 TPGS1Q6ZTW0 290 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 RALGPS2Q86X27 583 aaPredicted RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 HS6ST3Q8IZP7 471 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms