RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 MGME1Q9BQP7 344 aa11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 FARSBQ9NSD9 589 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 PNPLA3Q9NST1 481 aa11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 OLA1Q9NTK5 396 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 NDUFA13Q9P0J0 144 aa11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 AFF4Q9UHB7 1163 aaKnown RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 ZNHIT2Q9UHR6 403 aa11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 POLR3HQ9Y535 204 aaPredicted RBP11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
CHMP1B-201ENST00000526991 A0A1W2PP18 115 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 RFPL2O75678 378 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 RSL1D1O76021 490 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ESRRBO95718 433 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TSPAN12O95859 305 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 URODP06132 367 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 OGNP20774 298 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 SLC26A3P40879 764 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 MAPKAPK2P49137 400 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TXNL4AP83876 142 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 HMGCS1Q01581 520 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ELAVL2Q12926 359 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 LAPTM5Q13571 262 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 PTGR1Q14914 329 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TGFBIQ15582 683 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TYSND1Q2T9J0 566 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ANKRD34AQ69YU3 496 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 SLC8B1Q6J4K2 584 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 SFRP1Q8N474 314 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 GPR150Q8NGU9 434 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 RHEBL1Q8TAI7 183 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 HSFX1Q9UBD0 423 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 FAM8A1Q9UBU6 413 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 PCDHA9Q9Y5H5 950 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 FNDC1Q4ZHG4 1894 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ATG2BQ96BY7 2078 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 FAM92AA1XBS5 289 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 CCL16O15467 120 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TMCC1O94876 653 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 IGLV3-27P01718 113 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ATP6V0D1P61421 351 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 MERTKQ12866 999 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TAF1AQ15573 450 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ATP6AP1LQ52LC2 224 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 RFTN2Q52LD8 501 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 Q6ZSR9 355 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 APCDD1Q8J025 514 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 MINDY1Q8N5J2 469 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 PPP1R14BQ96C90 147 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 BIRC7Q96CA5 298 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 EID2BQ96D98 161 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ABHD8Q96I13 439 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ZNF558Q96NG5 402 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 EGFL8Q99944 293 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 CLK4Q9HAZ1 481 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 AGPAT4Q9NRZ5 378 aa11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 RSL24D1Q9UHA3 163 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 ZFC3H1O60293 1989 aaKnown RBP11.79□□□□□ -0.52
CHMP1B-201ENST00000526991 MAGEB3O15480 346 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 RPS17P08708 135 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 BMP2P12643 396 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 SLC2A4P14672 509 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 EEF1B2P24534 225 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 SUOXP51687 545 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 CDH18Q13634 790 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 TMEM259Q4ZIN3 620 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 PTRHD1Q6GMV3 140 aaKnown RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 HS3ST5Q8IZT8 346 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ANKFN1Q8N957 763 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 OR56A4Q8NGH8 313 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 FBXO30Q8TB52 745 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 PROKR1Q8TCW9 393 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 LKAAEAR1Q8TD35 194 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 FIG4Q92562 907 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 IL37Q9NZH6 218 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 CXXC1Q9P0U4 656 aaPredicted RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ACTR3BQ9P1U1 418 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 FNIP2Q9P278 1114 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ATXN10Q9UBB4 475 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 UTS2RQ9UKP6 389 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 FADS3Q9Y5Q0 445 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 TMEM247A6NEH6 219 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 SYCE1LA8MT33 242 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 BBIP1A8MTZ0 92 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 H3BNC9 293 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 E2F3O00716 465 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 EPOP01588 193 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 CAPNS1P04632 268 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 CDK4P11802 303 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 STK19P49842 368 aaPredicted RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ATP4BP51164 291 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ARF5P84085 180 aa11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 CBX2Q14781 532 aaPredicted RBP11.78□□□□□ -0.52
CHMP1B-201ENST00000526991 ABRAXAS2Q15018 415 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms