RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NRIP3Q9NQ35 241 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 NECTIN3Q9NQS3 549 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 VPS45Q9NRW7 570 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 RXFP3Q9NSD7 469 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 COMMD8Q9NX08 183 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 TAS2R14Q9NYV8 317 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 EHD2Q9NZN4 543 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 ADAM22Q9P0K1 906 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 WDR35Q9P2L0 1181 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 CHORDC1Q9UHD1 332 aaPredicted RBP4.58□□□□□ -1.68
USP48-211ENST00000526044 ASB3Q9Y575 518 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 MTCH2Q9Y6C9 303 aa4.58□□□□□ -1.68
USP48-211ENST00000526044 GREB1Q4ZG55 1949 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 FAM170AA1A519 330 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SIGLEC16A6NMB1 481 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SLC38A8A6NNN8 435 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 HHLA1C9JL84 531 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 F5H423 210 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 TULP2O00295 520 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ZSCAN12O43309 604 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 PRAMEF2O60811 474 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 RNF8O76064 485 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 RTN3O95197 1032 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 CALB1P05937 261 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 HNRNPA1P09651 372 aaKnown RBP eCLIP4.57□□□□□ -1.68
USP48-211ENST00000526044 CSH1P0DML2 217 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 CSH2P0DML3 217 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SRGAP2BP0DMP2 458 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MYBL1P10243 752 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 EPCAMP16422 314 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ITGB6P18564 788 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ABCB4P21439 1286 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 DRD1P21728 446 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MMP8P22894 467 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 YWHAQP27348 245 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 DEKP35659 375 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 RPL34P49207 117 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 RGS7P49802 495 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TKTL1P51854 596 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MRPS5P82675 430 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 PDCLQ13371 301 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 VEPH1Q14D04 833 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 C2CD6Q53TS8 623 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TCEAL5Q5H9L2 206 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MTX3Q5HYI7 312 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TMEM196Q5HYL7 178 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 RAB41Q5JT25 222 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 EFHC1Q5JVL4 640 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TMTC4Q5T4D3 741 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SDHAF4Q5VUM1 108 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 PM20D1Q6GTS8 502 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SLC18B1Q6NT16 456 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TMEM184AQ6ZMB5 413 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 DENND5BQ6ZUT9 1274 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 KRT77Q7Z794 578 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 PHLDB2Q86SQ0 1253 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 KIAA1328Q86T90 577 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ITIH5Q86UX2 942 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MON1AQ86VX9 555 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ZSCAN30Q86W11 494 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 DNAAF5Q86Y56 855 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MCOLN2Q8IZK6 566 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ELMOD1Q8N336 334 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 NKAPQ8N5F7 415 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 ZMIZ2Q8NF64 920 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SCAMP5Q8TAC9 235 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 IPO4Q8TEX9 1081 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 CTNNBL1Q8WYA6 563 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 OVCA2Q8WZ82 227 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 CASP10Q92851 521 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 KIAA1191Q96A73 305 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 PRR11Q96HE9 360 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 HIC2Q96JB3 615 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 CPXM1Q96SM3 734 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 C11orf70Q9BRQ4 267 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 EFHD1Q9BUP0 239 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ADGRE3Q9BY15 652 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 FBXO44Q9H4M3 255 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 SAP30LQ9HAJ7 183 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MRPL47Q9HD33 250 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 CNGB3Q9NQW8 809 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 TMEM30AQ9NV96 361 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 PARVAQ9NVD7 372 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 IL37Q9NZH6 218 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 CNOT8Q9UFF9 292 aaKnown RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 CYTH4Q9UIA0 394 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 FBXW11Q9UKB1 542 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 CA14Q9ULX7 337 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 MAGED2Q9UNF1 606 aaPredicted RBP4.57□□□□□ -1.68
USP48-211ENST00000526044 PCDHGB2Q9Y5G2 931 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 INSL5Q9Y5Q6 135 aa4.57□□□□□ -1.68
USP48-211ENST00000526044 ZNF638Q14966 1978 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 DNAJC9-AS1A6NH13 148 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 E5RJQ4 531 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 GOLGA8SH3BPF8 625 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 CAPN9O14815 690 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 DSCR3O14972 297 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ZNF263O14978 683 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms