RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 GPR87Q9BY21 358 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 SLC7A5P2Q9GIP4 190 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 SLC25A51Q9H1U9 297 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 FAM96AQ9H5X1 160 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 C10orf88Q9H8K7 445 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 GLOD4Q9HC38 313 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 IL26Q9NPH9 171 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 WASH6PQ9NQA3 447 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 RAD18Q9NS91 495 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 ASF1BQ9NVP2 202 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 HAUS2Q9NVX0 235 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 EPHA6Q9UF33 1036 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 AMACRQ9UHK6 382 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 ERRFI1Q9UJM3 462 aaPredicted RBP6.42□□□□□ -1.38
CD44-221ENST00000526000 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 ZNF451Q9Y4E5 1061 aa6.42□□□□□ -1.38
CD44-221ENST00000526000 GSAPA4D1B5 854 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 TMEM150CB9EJG8 249 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 MEN1O00255 615 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 APOL1O14791 398 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 AKR1B10O60218 316 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 DPM1O60762 260 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 SORBS2O94875 1100 aaKnown RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 AKT1P31749 480 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 CD68P34810 354 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 DCTP40126 519 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 PREPP48147 710 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 GLRBP48167 497 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 LMAN1P49257 510 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 KPNA2P52292 529 aaKnown RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 WNT3AP56704 352 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 IFI35P80217 286 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 TMPRSS15P98073 1019 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 PPIDQ08752 370 aaKnown RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 ABRQ12979 859 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 PRKG2Q13237 762 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 OLIG2Q13516 323 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 ATP1A4Q13733 1029 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 SLC9A5Q14940 896 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 SPA17Q15506 151 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 ASTE1Q2TB18 679 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 TEX44Q53QW1 395 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 TMTC4Q5T4D3 741 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 KLHL35Q6PF15 583 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 PID1Q7Z2X4 250 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 DAAM2Q86T65 1068 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 D2HGDHQ8N465 521 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 SPC24Q8NBT2 197 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 IPMKQ8NFU5 416 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 OR1L3Q8NH93 324 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 ZNF398Q8TD17 642 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 HAUS1Q96CS2 278 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 ZNF501Q96CX3 271 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 SNRNP40Q96DI7 357 aaKnown RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 RANBP9Q96S59 729 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 XKR8Q9H6D3 395 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 NHEJ1Q9H9Q4 299 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 TCFL5Q9UL49 500 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 SRPK3Q9UPE1 567 aa6.41□□□□□ -1.38
CD44-221ENST00000526000 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
CD44-221ENST00000526000 GLYATL1P3A0A0U1RQE8 302 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CCDC66A2RUB6 948 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 OR5K3A6NET4 321 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 TLCD2A6NGC4 264 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 BTN3A3O00478 584 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CCL22O00626 93 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 STX7O15400 261 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 ALOX12BO75342 701 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CBX6O95503 412 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 ZBTB11O95625 1053 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 RECKO95980 971 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 AGTP01019 485 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 KRT1P04264 644 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 PTMAP06454 111 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 CTSBP07858 339 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 H2AFZP0C0S5 128 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CBSLP0DN79 551 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 ST6GAL1P15907 406 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 NFKB1P19838 968 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 MSH3P20585 1137 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CYP2A7P20853 494 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 LPOP22079 712 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 PTPN3P26045 913 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CBSP35520 551 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SPAM1P38567 509 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 DCDC1P59894 354 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 TUBB4BP68371 445 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 LAMB3Q13751 1172 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 TUBB2AQ13885 445 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 PDK1Q15118 436 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 TCEAL1Q15170 157 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 ODF2Q5BJF6 829 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SIRPB2Q5JXA9 342 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 METRNLQ641Q3 311 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 MFSD7Q6UXD7 560 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 H2AFVQ71UI9 128 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 MAMDC2Q7Z304 686 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 TRIM73Q86UV7 250 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms