RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 HOXD12P35452 270 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SLCO1A2P46721 670 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CSRP3P50461 194 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CLCN7P51798 805 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CLDN6P56747 220 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ARHGAP8P85298 464 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 OVGP1Q12889 678 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 LAMB3Q13751 1172 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 GBX1Q14549 363 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TEAD4Q15561 434 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SEPT7Q16181 437 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 CSRP2Q16527 193 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CCSMST1Q4G0I0 132 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 HECTD2Q5U5R9 776 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 MRNIPQ6NTE8 343 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 FBXO38Q6PIJ6 1188 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CYHR1Q6ZMK1 362 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CYS1Q717R9 158 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TRMT10CQ7L0Y3 403 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 LRRTM4Q86VH4 590 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 GALNT13Q8IUC8 556 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CCNJLQ8IV13 435 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 CTAGE3PQ8IX95 158 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 KIAA2013Q8IYS2 634 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 NAGSQ8N159 534 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SPATA6LQ8N4H0 392 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 OXR1Q8N573 874 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 GPATCH11Q8N954 259 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SNIP1Q8TAD8 396 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 CD200R1Q8TD46 325 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 MZB1Q8WU39 189 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ANKRD49Q8WVL7 239 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 UBLCP1Q8WVY7 318 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 SLC44A1Q8WWI5 657 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 DLG3Q92796 817 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ULK4Q96C45 1275 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 VPS39Q96JC1 886 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 RMDN2Q96LZ7 410 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PAFAH2Q99487 392 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 GPR21Q99679 349 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 FAM167BQ9BTA0 163 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 NAT9Q9BTE0 207 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 EDEM2Q9BV94 578 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 NUSAP1Q9BXS6 441 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 FAM129AQ9BZQ8 928 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 ACSS3Q9H6R3 686 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ERVMER34-1Q9H9K5 563 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SARS2Q9NP81 518 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ZNF446Q9NWS9 450 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TAAR2Q9P1P5 351 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 VPS18Q9P253 973 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 ZNF624Q9P2J8 865 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 FAM95CA0A1B0GW59 222 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 A0A1W2PPM1 405 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 SMIM23A6NLE4 172 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 H3BMM5 538 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 J3QL48 77 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 TOR1BO14657 336 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 NDC80O14777 642 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 GIPC1O14908 333 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 KMOO15229 486 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 SIGLEC6O43699 453 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 GFRA3O60609 400 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 GPC4O75487 556 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 SASH3O75995 380 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 TSPAN12O95859 305 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 ABHD2P08910 425 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 CREB1P16220 341 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 SAT1P21673 171 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 FDXRP22570 491 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 MCM3P25205 808 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 ACADLP28330 430 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 ACTR1BP42025 376 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 NSG1P42857 185 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 CD151P48509 253 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 KCNC1P48547 511 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 TTPAP49638 278 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 LIMK2P53671 638 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 ACTR1AP61163 376 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 IRF9Q00978 393 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 PTK2BQ14289 1009 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 SLMAPQ14BN4 828 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 OCLNQ16625 522 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 INSCQ1MX18 579 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 UAP1L1Q3KQV9 507 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 MROH9Q5TGP6 573 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 ARMC3Q5W041 872 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 PTRHD1Q6GMV3 140 aaKnown RBP6.35□□□□□ -1.39
CD44-214ENST00000525211 PAQR3Q6TCH7 311 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 CERS6Q6ZMG9 384 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 DBX2Q6ZNG2 339 aa6.35□□□□□ -1.39
CD44-214ENST00000525211 PIWIL4Q7Z3Z4 852 aaKnown RBP6.35□□□□□ -1.39
CD44-214ENST00000525211 TAF8Q7Z7C8 310 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms