RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 MRPS21P82921 87 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LRMPQ12912 555 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PRPF4BQ13523 1007 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CSHL1Q14406 222 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 IHHQ14623 411 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 HLXQ14774 488 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TBCCQ15814 346 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PTCHD3Q3KNS1 767 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 EOGTQ5NDL2 527 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 GPR139Q6DWJ6 353 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 VWA1Q6PCB0 445 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LINGO4Q6UY18 593 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SYNE3Q6ZMZ3 975 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 RBM44Q6ZP01 1051 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 FAM47EQ6ZV65 393 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 USP51Q70EK9 711 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 IKBIPQ70UQ0 350 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 GALNTL5Q7Z4T8 443 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 KCNMB4Q86W47 210 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 P3H2Q8IVL5 708 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ADGRG5Q8IZF4 528 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SRBD1Q8N5C6 995 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 RBMXL3Q8N7X1 1067 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ARL10Q8N8L6 244 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 FAM71DQ8N9W8 422 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CADM4Q8NFZ8 388 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LINS1Q8NG48 757 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 METTL6Q8TCB7 284 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 BPIFB1Q8TDL5 484 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SNX19Q92543 992 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PNPLA2Q96AD5 504 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TMEM125Q96AQ2 219 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 FAM120BQ96EK7 910 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 KTI12Q96EK9 354 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SPATA33Q96N06 139 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 DESI2Q9BSY9 194 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 MECRQ9BV79 373 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 REXO4Q9GZR2 422 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 INTS2Q9H0H0 1204 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 OR10A4Q9H209 315 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ZWILCHQ9H900 591 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 GRPEL1Q9HAV7 217 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PLEKHA2Q9HB19 425 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CCDC177Q9NQR7 707 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 FGF21Q9NSA1 209 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ECHDC1Q9NTX5 307 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LIN7CQ9NUP9 197 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 MARCH5Q9NX47 278 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 KCTD5Q9NXV2 234 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TAS2R10Q9NYW0 307 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 DNAJB11Q9UBS4 358 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TINAGQ9UJW2 476 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PACSIN3Q9UKS6 424 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 BAG5Q9UL15 447 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 USP22Q9UPT9 525 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SHOC2Q9UQ13 582 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 GINS2Q9Y248 185 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF711Q9Y462 761 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LYVE1Q9Y5Y7 322 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CDY1Q9Y6F8 540 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TP53BP1Q12888 1972 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 A6NL46 340 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 AGAP14A8MT82 685 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 SMTNL1A8MU46 457 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 A8MV72 311 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 F8W810 466 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 M0QZ92 97 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 E2F3O00716 465 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 ADAM12O43184 909 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 DHHO43323 396 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 TBCAO75347 108 aaKnown RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 TULP3O75386 442 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 LRCH4O75427 683 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 ESRRBO95718 433 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 LGALS2P05162 132 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 SPARCP09486 303 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 TMIGD3P0DMS9 266 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 NR2F1P10589 423 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 MUTP22033 750 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 PRKCHP24723 683 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 NFKBIAP25963 317 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 ABCD1P33897 745 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 NNMTP40261 264 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 TNNT3P45378 269 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 VAMP7P51809 220 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 RARSP54136 660 aaKnown RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 LOXL3P58215 753 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 LILRA4P59901 499 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 ADORA2A-AS1P86434 159 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 SF3A3Q12874 501 aaKnown RBP eCLIP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 STK4Q13043 487 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 PPP2R5CQ13362 524 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 PRICKLE4Q2TBC4 344 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 P3H1Q32P28 736 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 ZIK1Q3SY52 487 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-209ENST00000525132 LRRC24Q50LG9 513 aa3.11□□□□□ -1.91
CSDE1-209ENST00000525132 CBWD5Q5RIA9 395 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms