RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PREPP48147 710 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 UCNP55089 124 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 MC2RQ01718 297 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 VAC14Q08AM6 782 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 KRT33BQ14525 404 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 BRD3Q15059 726 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 DCAF12Q5T6F0 453 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 CAPRIN2Q6IMN6 1127 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 NAPRTQ6XQN6 538 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 CCDC81Q6ZN84 652 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 RASGEF1CQ8N431 466 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 PPHLN1Q8NEY8 458 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 COG1Q8WTW3 980 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 CCNL2Q96S94 520 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 COG4Q9H9E3 785 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 CHRAC1Q9NRG0 131 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 HOMER3Q9NSC5 361 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 ACSL6Q9UKU0 697 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 LAMA5O15230 3695 aa12.55□□□□□ -0.4
TRAPPC4-205ENST00000525079 C17orf113A0A1B0GUU1 675 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 KLHL33A6NCF5 533 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR1I1O60431 355 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 KRT14P02533 472 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 MGAT1P26572 445 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 CAPZBP47756 277 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 SH3BP2P78314 561 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 PRAMEP78395 509 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 FOXM1Q08050 763 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 GPS1Q13098 491 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 LAMB3Q13751 1172 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 SEMA3AQ14563 771 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 PCID2Q5JVF3 399 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 CACHD1Q5VU97 1274 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 AFTPHQ6ULP2 937 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 C4orf22Q6V702 233 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR4L1Q8NH43 312 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 FERD3LQ96RJ6 166 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 NRTNQ99748 197 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 EIF2B3Q9NR50 452 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 SLC24A2Q9UI40 661 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 PCDHB11Q9Y5F2 797 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 PCDHGA3Q9Y5H0 932 aa12.54□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR6C74A6NCV1 312 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 USP27XA6NNY8 438 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 K7ENP7 123 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZNF185O15231 689 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 KIF5CO60282 957 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 AP2A2O94973 939 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ITGB6P18564 788 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 CD82P27701 267 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 NMBRP28336 390 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 NSG1P42857 185 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 NPY2RP49146 381 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ACVR1Q04771 509 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ITIH4Q14624 930 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZNF658BQ4V348 819 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 FASTKD1Q53R41 847 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 KIAA1614Q5VZ46 1190 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 INO80CQ6PI98 192 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 DTX1Q86Y01 620 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR4E2Q8NGC2 313 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ZDHHC12Q96GR4 267 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 OSBPL9Q96SU4 736 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 OR52A5Q9H2C5 316 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 VPS37BQ9H9H4 285 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 FBXO8Q9NRD0 319 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 HRASLS2Q9NWW9 162 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 SYBUQ9NX95 663 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 MARCH4Q9P2E8 410 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 RIMKLBQ9ULI2 386 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 COLEC10Q9Y6Z7 277 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
TRAPPC4-205ENST00000525079 IGHV5-51A0A0C4DH38 117 aa12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 TEX51A0A1B0GUA7 166 aa12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 OR5K3A6NET4 321 aa12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 PGRMC1O00264 195 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 POLR1CO15160 346 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 AVILO75366 819 aa12.52□□□□□ -0.41
TRAPPC4-205ENST00000525079 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms