RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 SIDT2Q8NBJ9 832 aaKnown RBP11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 OR2L2Q8NH16 312 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 CT55Q8WUE5 264 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 STAMBPL1Q96FJ0 436 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 SPATA13Q96N96 652 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 TBL1YQ9BQ87 522 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 EFHD1Q9BUP0 239 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 EPN3Q9H201 632 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 TUBD1Q9UJT1 453 aa11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 DNMT3AQ9Y6K1 912 aaPredicted RBP11.54□□□□□ -0.56
CLNS1A-202ENST00000525064 PCSK5Q92824 1860 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 SEC16AO15027 2179 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 OR5K3A6NET4 321 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 C2orf81A6NN90 581 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 DDX3YO15523 660 aaKnown RBP11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 KATNA1O75449 491 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 POLBP06746 335 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 PYGMP11217 842 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 TUBB3Q13509 450 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 ERV3-1Q14264 604 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 IL11RAQ14626 422 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 FAM199XQ6PEV8 388 aaPredicted RBP11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 C9orf43Q8TAL5 461 aaPredicted RBP11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 ABHD17AQ96GS6 310 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 PANX2Q96RD6 677 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 RBSNQ9H1K0 784 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 LHX9Q9NQ69 397 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 CRLS1Q9UJA2 301 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 TP53TG5Q9Y2B4 290 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 EFR3BQ9Y2G0 817 aa11.53□□□□□ -0.56
CLNS1A-202ENST00000525064 CCDC66A2RUB6 948 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 CDC14CA4D256 554 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 C5orf60A6NFR6 353 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 TLCD2A6NGC4 264 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 AGAP14A8MT82 685 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 LDB2O43679 373 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 NTRK1P04629 796 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 PRLHRP49683 370 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 RWDD2BP57060 319 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 RPS18P62269 152 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 MC1RQ01726 317 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 DNASE1L3Q13609 305 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 GPR19Q15760 415 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 ZNF658BQ4V348 819 aaPredicted RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 PRAMEF17Q5VTA0 474 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 KCTD11Q693B1 232 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 OOSP2Q86WS3 158 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 NXPE1Q8N323 547 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 UBXN4Q92575 508 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 DNAJC1Q96KC8 554 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 LINC00615Q96LM1 132 aaPredicted RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 KIR3DX1Q9H7L2 352 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 PIH1D1Q9NWS0 290 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 HRASLS2Q9NWW9 162 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 RARRES3Q9UL19 164 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 KCNMB2Q9Y691 235 aa11.52□□□□□ -0.57
CLNS1A-202ENST00000525064 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 HECTD1Q9ULT8 2610 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 TCRBV7S2A1N4TA0A589 114 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 ARHGAP6O43182 974 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 METTL18O95568 372 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 SLC35G4P0C7Q5 338 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 TPH1P17752 444 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 MC4RP32245 332 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 VAV2P52735 878 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 GDF10P55107 478 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 LAMB3Q13751 1172 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 SNX20Q7Z614 316 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 TMTC1Q8IUR5 882 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 TMEM139Q8IV31 216 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 CFAP206Q8IYR0 622 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 MRFAP1L1Q96HT8 127 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 ZNF514Q96K75 400 aaPredicted RBP11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 CD180Q99467 661 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 PDE7BQ9NP56 450 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 LUC7LQ9NQ29 371 aaKnown RBP11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 FGF21Q9NSA1 209 aa11.51□□□□□ -0.57
CLNS1A-202ENST00000525064 AAR2Q9Y312 384 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms