RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 NECTIN3Q9NQS3 549 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 SMOXQ9NWM0 555 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 RHBDL2Q9NX52 303 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 USE1Q9NZ43 259 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 UBP1Q9NZI7 540 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 IFT80Q9P2H3 777 aaPredicted RBP6.62□□□□□ -1.35
ATM-206ENST00000525056 SLC17A6Q9P2U8 582 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 POLG2Q9UHN1 485 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 C3orf18Q9UK00 162 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 PACSIN3Q9UKS6 424 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 ERVW-1Q9UQF0 538 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 COQ6Q9Y2Z9 468 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 TNPO3Q9Y5L0 923 aaKnown RBP6.62□□□□□ -1.35
ATM-206ENST00000525056 SNX5Q9Y5X3 404 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
ATM-206ENST00000525056 TET1Q8NFU7 2136 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CITO14578 2027 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 MN1Q10571 1320 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 FUOMA2VDF0 154 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 MBLAC1A4D2B0 266 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 SOCS2O14508 198 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ARPC2O15144 300 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 SEPT4O43236 478 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CRCPO75575 148 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TIPRLO75663 272 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 WISP3O95389 354 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 EOMESO95936 686 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 AMHP03971 560 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CYBBP04839 570 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 SPATA31D3P0C874 917 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 PRR35P0CG20 571 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ODC1P11926 461 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ITIH1P19827 911 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TCN1P20061 433 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 SPINK2P20155 84 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 S100A1P23297 94 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 BMP8BP34820 402 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 GLRBP48167 497 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 RXRGP48443 463 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 BCAP31P51572 246 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CRYBB1P53674 252 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 ATXN1P54253 815 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 CXCR4P61073 352 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ERVK-8P63133 956 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 RACK1P63244 317 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 RELAQ04206 551 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 EMX2Q04743 252 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 PRKG2Q13237 762 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 PEX6Q13608 980 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 NFYCQ13952 458 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 DAG1Q14118 895 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CSHL1Q14406 222 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ACOX1Q15067 660 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CYP51A1Q16850 503 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 GEN1Q17RS7 908 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 MSMPQ1L6U9 139 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ZNF792Q3KQV3 632 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 DUSP28Q4G0W2 176 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 AARS2Q5JTZ9 985 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 TMEM201Q5SNT2 666 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 HECTD2Q5U5R9 776 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 MANEALQ5VSG8 457 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 AFMIDQ63HM1 303 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TMEM198Q66K66 360 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 HMBOX1Q6NT76 420 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 UGT3A1Q6NUS8 523 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CNSTQ6PJW8 725 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 CES3Q6UWW8 571 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 SLC39A5Q6ZMH5 540 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 DCDC5Q6ZRR9 648 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 SPATA31D4Q6ZUB0 917 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 NCCRP1Q6ZVX7 275 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 KCTD8Q6ZWB6 473 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 THAP5Q7Z6K1 395 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 SLC15A3Q8IY34 581 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TDHQ8IZJ6 230 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 UMODL1-AS1Q8N2C9 162 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TMEM199Q8N511 208 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 DEFB123Q8N688 67 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 RTL3Q8N8U3 475 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 FAM181AQ8N9Y4 354 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ARRDC4Q8NCT1 418 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 CLEC4CQ8WTT0 213 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TWIST2Q8WVJ9 160 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 FCGR1BQ92637 280 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 IMP4Q96G21 291 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 UROC1Q96N76 676 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 RBM4BQ9BQ04 359 aaKnown RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 DPH2Q9BQC3 489 aaPredicted RBP6.61□□□□□ -1.35
ATM-206ENST00000525056 PSD2Q9BQI7 771 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 TINF2Q9BSI4 451 aa6.61□□□□□ -1.35
ATM-206ENST00000525056 C16orf70Q9BSU1 422 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms