RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 COL4A2P08572 1712 aa3.07□□□□□ -1.92
CSDE1-208ENST00000524652 DOCK4Q8N1I0 1966 aa3.07□□□□□ -1.92
CSDE1-208ENST00000524652 USP24Q9UPU5 2620 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 IFITM10A6NMD0 228 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 HIDE1A8MVS5 230 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 INAFM1C9JVW0 142 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 MSI1O43347 362 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 RGS14O43566 566 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SPRY3O43610 288 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 FGF18O76093 207 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 NOL4O94818 638 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LETM1O95202 739 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 VNN2O95498 520 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ASS1P00966 412 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 AFPP02771 609 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 KRT19P08727 400 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ALDOCP09972 364 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 OR4Q2P0C623 313 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PNMA6AP0CW24 399 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ARSBP15848 533 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LMO2P25791 158 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PON1P27169 355 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 HOXD3P31249 432 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 CTNNB1P35222 781 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 MTIF2P46199 727 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 MXI1P50539 228 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ART1P52961 327 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TAS2R50P59544 299 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SHC2P98077 582 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TFAMQ00059 246 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 RNASELQ05823 741 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ENPEPQ07075 957 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GOLGA8FQ08AF8 430 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GOLGA8DPQ0D2H9 430 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LRMPQ12912 555 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PMS2P11Q13670 270 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 KYAT1Q16773 422 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SOWAHAQ2M3V2 549 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 DOPEY1Q5JWR5 2465 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 DGKKQ5KSL6 1271 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 OTUD1Q5VV17 481 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 KRT39Q6A163 491 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 HIBCHQ6NVY1 386 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 FUT10Q6P4F1 479 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 FBXO38Q6PIJ6 1188 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PRSS55Q6UWB4 352 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GSG1LQ6UXU4 331 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SCARA5Q6ZMJ2 495 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 Q6ZTK2 550 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 KIAA1549LQ6ZVL6 1849 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 USP43Q70EL4 1123 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 INTS8Q75QN2 995 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TICRRQ7Z2Z1 1910 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 CUZD1Q86UP6 607 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 CREBRFQ8IUR6 639 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 WDR75Q8IWA0 830 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 CD302Q8IX05 232 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TXLNBQ8N3L3 684 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 DEFB123Q8N688 67 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 BEST2Q8NFU1 509 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 VN1R2Q8NFZ6 395 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GABPB2Q8TAK5 448 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 OLIG1Q8TAK6 271 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LNX1Q8TBB1 728 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 URGCPQ8TCY9 931 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 POF1BQ8WVV4 589 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ARNTL2Q8WYA1 636 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 RSPH1Q8WYR4 309 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ANKRD36BP1Q96IX9 119 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LMLNQ96KR4 655 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SENP8Q96LD8 212 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF558Q96NG5 402 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GUCD1Q96NT3 240 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TGS1Q96RS0 853 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 FNBP1Q96RU3 617 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PKMYT1Q99640 499 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 MRPL45Q9BRJ2 306 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TMEM175Q9BSA9 504 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 CRACR2AQ9BSW2 395 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 HERC2P3Q9BVR0 1158 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 NAA15Q9BXJ9 866 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 MRPL9Q9BYD2 267 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 GANQ9H2C0 597 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 NDST4Q9H3R1 872 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 DPEP3Q9H4B8 488 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 UBN1Q9NPG3 1134 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ACP6Q9NPH0 428 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 PNRC2Q9NPJ4 139 aaKnown RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TMEM30AQ9NV96 361 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 TMLHEQ9NVH6 421 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 RAB20Q9NX57 234 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ARMCX3Q9UH62 379 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ADAM28Q9UKQ2 775 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 FZD10Q9ULW2 581 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 NFU1Q9UMS0 254 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 SPEGQ15772 3267 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 WDR87Q6ZQQ6 2873 aa3.06□□□□□ -1.92
CSDE1-208ENST00000524652 ATG2BQ96BY7 2078 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CHD5Q8TDI0 1954 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms