RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	BRD9	Q9H8M2	597 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	LIN28A	Q9H9Z2	209 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CSNK1G1	Q9HCP0	422 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	HEBP1	Q9NRV9	189 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	CMTM6	Q9NX76	183 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	UBP1	Q9NZI7	540 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	COX16	Q9P0S2	106 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ACTR3B	Q9P1U1	418 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	MRPS17	Q9Y2R5	130 aa	Known RBP	7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	NDUFAF1	Q9Y375	327 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	PCDHA9	Q9Y5H5	950 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF318	Q5VUA4	2279 aa		7.74	□□□□□ -1.17
SPIDR-223	ENST00000524033	DHRS12	A0PJE2	317 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CCDC78	A2IDD5	438 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MATN3	O15232	486 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	IRAK2	O43187	625 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	LAMTOR5	O43504	91 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MOSPD3	O75425	235 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ATE1	O95260	518 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PAPSS2	O95340	614 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	VNN2	O95498	520 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PEX11B	O96011	259 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MT-CYB	P00156	380 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	GPI	P06744	558 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	FGF4	P08620	206 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	GFAP	P14136	432 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	GJA1	P17302	382 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PAM	P19021	973 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	IMPDH1	P20839	514 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	FCAR	P24071	287 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	GDI1	P31150	447 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZFP36L2	P47974	494 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TUFM	P49411	452 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SCNN1B	P51168	640 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	EPHA5	P54756	1037 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MAP3K7CL	P57077	242 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ADARB1	P78563	741 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CSTF1	Q05048	431 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MERTK	Q12866	999 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SFSWAP	Q12872	951 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ILF2	Q12905	390 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PLD1	Q13393	1074 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SPIDR	Q14159	915 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CSHL1	Q14406	222 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	POU6F1	Q14863	301 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TEAD2	Q15562	447 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	FAM83E	Q2M2I3	478 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SLC39A12	Q504Y0	691 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF789	Q5FWF6	425 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	BRMS1L	Q5PSV4	323 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SAMD5	Q5TGI4	173 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	HECTD2	Q5U5R9	776 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	FAM219B	Q5XKK7	198 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	KANK2	Q63ZY3	851 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ZNF470	Q6ECI4	717 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	OGFOD2	Q6N063	350 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	NEPRO	Q6NW34	567 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TMEM207	Q6UWW9	146 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TPRG1	Q6ZUI0	275 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PATL1	Q86TB9	770 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	METTL23	Q86XA0	190 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MAML2	Q8IZL2	1156 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	THEM5	Q8N1Q8	247 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	SPATA6L	Q8N4H0	392 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ATAD1	Q8NBU5	361 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PDPR	Q8NCN5	879 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	OR9I1	Q8NGQ6	314 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TBC1D15	Q8TC07	691 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CALML6	Q8TD86	181 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	DQX1	Q8TE96	717 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	USP33	Q8TEY7	942 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	ANKRD49	Q8WVL7	239 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TANK	Q92844	425 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	IRF7	Q92985	503 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TMEM125	Q96AQ2	219 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CLDN23	Q96B33	292 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	C19orf60	Q96EN9	201 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	HSPBAP1	Q96EW2	488 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TSPAN17	Q96FV3	270 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CELF6	Q96J87	481 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	C3orf30	Q96M34	536 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	DMRTB1	Q96MA1	342 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	HOPX	Q9BPY8	73 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	C9orf16	Q9BUW7	83 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TKTL2	Q9H0I9	626 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	MUC3B	Q9H195	1237 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	NOL11	Q9H8H0	719 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRPV4	Q9HBA0	871 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	PALMD	Q9NP74	551 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	LTB4R2	Q9NPC1	389 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	DDIT4	Q9NX09	232 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	RHBDL2	Q9NX52	303 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	CCDC167	Q9P0B6	97 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	EBF1	Q9UH73	591 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	FBXO4	Q9UKT5	387 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	DSE	Q9UL01	958 aa		7.73	□□□□□ -1.17
SPIDR-223	ENST00000524033	TRAF6	Q9Y4K3	522 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms