RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 EBNA1BP2Q99848 306 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 WWP1Q9H0M0 922 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 INTS10Q9NVR2 710 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 MARCH4Q9P2E8 410 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 WDR37Q9Y2I8 494 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 COLEC10Q9Y6Z7 277 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 UNC13CQ8NB66 2214 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 CCDC187A0A096LP49 1063 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 TRABD2BA6NFA1 517 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 OR52A4PA6NMU1 304 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 KPNA5O15131 536 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 OR1I1O60431 355 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 CD1CP29017 333 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 RPL21P46778 160 aaKnown RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 CAV1Q03135 178 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 THOC5Q13769 683 aaKnown RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 BBS9Q3SYG4 887 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 PTRHD1Q6GMV3 140 aaKnown RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM71Q6P5X7 295 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 WDR74Q6RFH5 385 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 XKR5Q6UX68 686 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 MICALCLQ6ZW33 695 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 CILP2Q8IUL8 1156 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 SLITRK4Q8IW52 837 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 AGGF1Q8N302 714 aaeCLIP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 ELMO1Q92556 727 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 C12orf66Q96MD2 445 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 FAM167BQ9BTA0 163 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 TRIM31Q9BZY9 425 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 PHACTR1Q9C0D0 580 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 OR52A5Q9H2C5 316 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 EPB41L5Q9HCM4 733 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 IMP3Q9NV31 184 aaKnown RBP12.28□□□□□ -0.44
VEGFA-225ENST00000523950 PSMD13Q9UNM6 376 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 SNX24Q9Y343 169 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 PCDHGA8Q9Y5G5 932 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 MRFAP1Q9Y605 127 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 PRSS21Q9Y6M0 314 aa12.28□□□□□ -0.44
VEGFA-225ENST00000523950 KNTC1P50748 2209 aa12.27□□□□□ -0.44
VEGFA-225ENST00000523950 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 E7ESA3 106 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 TP73O15350 636 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.451e-6■■□□□ 11.7
VEGFA-225ENST00000523950 ESR1P03372 595 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 PROS1P07225 676 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 LSSP48449 732 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 LIMK2P53671 638 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 GPR18Q14330 331 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 FRG1Q14331 258 aaKnown RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 CRYMQ14894 314 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 TMED2Q15363 201 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 DUPD1Q68J44 220 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 C8orf74Q6P047 294 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 KLHL35Q6PF15 583 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 LDB1Q86U70 411 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 PDZD3Q86UT5 571 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 WDR36Q8NI36 951 aaKnown RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 NAT14Q8WUY8 206 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 ASZ1Q8WWH4 475 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 LPGAT1Q92604 370 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 ATXN7L3BQ96GX2 97 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 RMDN2Q96LZ7 410 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 NUDT22Q9BRQ3 303 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 RAB33BQ9H082 229 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 ZMYND15Q9H091 742 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 CCDC86Q9H6F5 360 aaKnown RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 MVB12BQ9H7P6 319 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 POLR1BQ9H9Y6 1135 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 C20orf96Q9NUD7 363 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 AKAP7Q9P0M2 348 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 PDP2Q9P2J9 529 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 ATXN7L1Q9ULK2 861 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-225ENST00000523950 TEX264Q9Y6I9 313 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
VEGFA-225ENST00000523950 UBA6A0AVT1 1052 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-225ENST00000523950 C1QTNF9BB2RNN3 333 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 GOLGA8KD6RF30 607 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 GOLGA8TH3BQL2 631 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-225ENST00000523950 DXOO77932 396 aaKnown RBP12.26□□□□□ -0.45
VEGFA-225ENST00000523950 UBXN7O94888 489 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 APOA4P06727 396 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 THRAP10827 490 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 AMD1P17707 334 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 CSF2RBP32927 897 aa12.26□□□□□ -0.45
VEGFA-225ENST00000523950 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms