RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 GBGT1Q8N5D6 347 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 TSPAN14Q8NG11 270 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 RDM1Q8NG50 284 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 WDR20Q8TBZ3 569 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 PTERQ96BW5 349 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 ERLEC1Q96DZ1 483 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 CCDC106Q9BWC9 280 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 SEMA6AQ9H2E6 1030 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 HHATLQ9HCP6 504 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 ICAM5Q9UMF0 924 aa3.65□□□□□ -1.83
PCM1-220ENST00000523896 A0A0G2JNG1 304 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 GPR137BO60478 399 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 BMP10O95393 424 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 LDLRP01130 860 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 MCCP23508 829 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 DGKAP23743 735 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 MATR3P43243 847 aaKnown RBP eCLIP3.64□□□□□ -1.83
PCM1-220ENST00000523896 CAPZA2P47755 286 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ZNF132P52740 706 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 UBXN2AP68543 259 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 CDK3Q00526 305 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 AIMP1Q12904 312 aaKnown RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 GAGE5Q13069 117 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 GAGE6Q13070 117 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 PRPF4BQ13523 1007 aaKnown RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 ALCAMQ13740 583 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 KIR2DS5Q14953 304 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 CBWD6Q4V339 395 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ZNF628Q5EBL2 1059 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 CBWD3Q5JTY5 395 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 GCNT6Q5T4J0 391 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 WBP2NLQ6ICG8 309 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 TMEM211Q6ICI0 200 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 PLXDC2Q6UX71 529 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 DENND5BQ6ZUT9 1274 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 FOXL2NBQ6ZUU3 175 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 EXOC3L1Q86VI1 746 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 CCDC191Q8NCU4 936 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 RBM15BQ8NDT2 890 aaKnown RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 LINGO1Q96FE5 620 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 PGAP3Q96FM1 320 aaPredicted RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 PRMT6Q96LA8 375 aaPredicted RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 ZNF582Q96NG8 517 aaPredicted RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 MS4A10Q96PG2 267 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 OR6C1Q96RD1 312 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 PKP4Q99569 1192 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 C16orf70Q9BSU1 422 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 LRRC1Q9BTT6 524 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 SLA2Q9H6Q3 261 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ZNF556Q9HAH1 456 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 NFKBIL1Q9UBC1 381 aaPredicted RBP3.64□□□□□ -1.83
PCM1-220ENST00000523896 IL17BQ9UHF5 180 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ZNF711Q9Y462 761 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 ARAP1Q96P48 1450 aa3.64□□□□□ -1.83
PCM1-220ENST00000523896 NESP48681 1621 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TRBC2A0A5B9 178 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 HEPACAM2A8MVW5 462 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 SYNGR3O43761 229 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 GCNT3O95395 438 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 CSF2RAP15509 400 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 MMP15P51511 669 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 CCR3P51677 355 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TERF1P54274 439 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 CDH13P55290 713 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 ERVFC1-1P60608 527 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 RPL24P83731 157 aaKnown RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 POU3F1Q03052 451 aaPredicted RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 SNAPC1Q16533 368 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 CRY2Q49AN0 593 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 C9orf50Q5SZB4 431 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 FIGLAQ6QHK4 219 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 PACS1Q6VY07 963 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 PLPPR4Q7Z2D5 763 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 DSG4Q86SJ6 1040 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 LONP2Q86WA8 852 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 PTOV1Q86YD1 416 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 RFLNBQ8N5W9 214 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TC2NQ8N9U0 490 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TDRD5Q8NAT2 981 aaKnown RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 CFAP61Q8NHU2 1237 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 SPATA20Q8TB22 786 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 SEMA4DQ92854 862 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 ARSGQ96EG1 525 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 OXNAD1Q96HP4 312 aaPredicted RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 FAM81BQ96LP2 452 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 SLX1AQ9BQ83 275 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 POLR3CQ9BUI4 534 aaPredicted RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 RETREG1Q9H6L5 497 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 ANKZF1Q9H8Y5 726 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TRPC7Q9HCX4 862 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 MBNL1Q9NR56 388 aaKnown RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 MIOSQ9NXC5 875 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 DDX25Q9UHL0 483 aaKnown RBP3.63□□□□□ -1.83
PCM1-220ENST00000523896 GRIP1Q9Y3R0 1128 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 NME7Q9Y5B8 376 aa3.63□□□□□ -1.83
PCM1-220ENST00000523896 TEX13DA0A0J9YY54 714 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms