RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GALNT13Q8IUC8 556 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 FAM45AQ8TCE6 357 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 ZNF514Q96K75 400 aaPredicted RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 LINC00615Q96LM1 132 aaPredicted RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 OLFM1Q99784 485 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 LRRC61Q9BV99 259 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 ROPN1BQ9BZX4 212 aaPredicted RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 CCDC68Q9H2F9 335 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 CAB39LQ9H9S4 337 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 ROPN1Q9HAT0 212 aaPredicted RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 GALPQ9UBC7 116 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 SLC23A2Q9UGH3 650 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 APOBEC2Q9Y235 224 aaKnown RBP11.72□□□□□ -0.53
PVT1-215ENST00000522963 PLEKHM1Q9Y4G2 1056 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 COMMD10Q9Y6G5 202 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 DGKBQ9Y6T7 804 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 LAMA1P25391 3075 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 BPTFQ12830 3046 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 LRP4O75096 1905 aa11.72□□□□□ -0.53
PVT1-215ENST00000522963 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 KMOO15229 486 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SASH3O75995 380 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 KRT38O76015 456 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 TRIM16O95361 564 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 CELA2BP08218 269 aaPredicted RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 ADRB1P08588 477 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 CHRM3P20309 590 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SAT1P21673 171 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 FDXRP22570 491 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 CCR7P32248 378 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 TAS2R39P59534 338 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 RASA2Q15283 850 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 ZNF658BQ4V348 819 aaPredicted RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 CEP85LQ5SZL2 805 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 XKR5Q6UX68 686 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 NAPRTQ6XQN6 538 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SLCO6A1Q86UG4 719 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 PIM3Q86V86 326 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 BAHD1Q8TBE0 780 aaPredicted RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 KCNJ9Q92806 393 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 OR2M4Q96R27 311 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SLC30A3Q99726 388 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 CCM2Q9BSQ5 444 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SARS2Q9NP81 518 aaKnown RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SIRPGQ9P1W8 387 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 GULP1Q9UBP9 304 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 TBK1Q9UHD2 729 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 SLC39A10Q9ULF5 831 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 VWA7Q9Y334 891 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 GPSM3Q9Y4H4 160 aa11.71□□□□□ -0.53
PVT1-215ENST00000522963 DNMT3AQ9Y6K1 912 aaPredicted RBP11.71□□□□□ -0.53
PVT1-215ENST00000522963 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.54
PVT1-215ENST00000522963 NCOR2Q9Y618 2525 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 IQANK1A0A1B0GTG1 560 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 MGAT4DA6NG13 374 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 TRIM49D1C9J1S8 452 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 E5RI56 91 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 F8W8V4 182 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 MAP2K7O14733 419 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CDH16O75309 829 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 VPS26AO75436 327 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 KRT37O76014 449 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 TOP3BO95985 862 aaKnown RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 FTH1P02794 183 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 SNRPAP09012 282 aaKnown RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 ACP5P13686 325 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 SPINK2P20155 84 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CD9P21926 228 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CNTFP26441 200 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 AOAHP28039 575 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CLCN7P51798 805 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 POU4F1Q01851 419 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 ZNF460Q14592 562 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 TMED2Q15363 201 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 ELOCQ15369 112 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 INSCQ1MX18 579 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 KRT71Q3SY84 523 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 TAOK1Q7L7X3 1001 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CHST15Q7LFX5 561 aaPredicted RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 TAF8Q7Z7C8 310 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 RIBC1Q8N443 379 aaPredicted RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 FSTL5Q8N475 847 aaPredicted RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 CHCHD4Q8N4Q1 142 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 LILRA3Q8N6C8 439 aaPredicted RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 SIDT2Q8NBJ9 832 aaKnown RBP11.7□□□□□ -0.54
PVT1-215ENST00000522963 OR4C6Q8NH72 309 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 GIMAP7Q8NHV1 300 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 CCL4L1Q8NHW4 92 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 MZB1Q8WU39 189 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 ELMO1Q92556 727 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 PANX3Q96QZ0 392 aa11.7□□□□□ -0.54
PVT1-215ENST00000522963 GPR21Q99679 349 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms