RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 LRRC3BQ96PB8 259 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 NAP1L3Q99457 506 aaPredicted RBP6.84□□□□□ -1.31
PVT1-214ENST00000522875 PRMT1Q99873 361 aaKnown RBP6.84□□□□□ -1.31
PVT1-214ENST00000522875 FAM118BQ9BPY3 351 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 HERPUD2Q9BSE4 406 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 RPP25Q9BUL9 199 aaKnown RBP6.84□□□□□ -1.31
PVT1-214ENST00000522875 TUBB2BQ9BVA1 445 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 PHF7Q9BWX1 381 aaPredicted RBP6.84□□□□□ -1.31
PVT1-214ENST00000522875 CARD6Q9BX69 1037 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 AP1M1Q9BXS5 423 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 CHST8Q9H2A9 424 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 ETNK2Q9NVF9 386 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 PLK2Q9NYY3 685 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 CHD7Q9P2D1 2997 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 RCOR3Q9P2K3 495 aaPredicted RBP6.84□□□□□ -1.31
PVT1-214ENST00000522875 RNF14Q9UBS8 474 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 CHD9Q3L8U1 2897 aa6.84□□□□□ -1.31
PVT1-214ENST00000522875 VCANP13611 3396 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 GOLGA6L10A0A0M3HER8 536 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MBD3L4A6NDZ8 208 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 MBD3L3A6NE82 208 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 NEDD8-MDP1E9PL57 170 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 DFFAO00273 331 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MFSD11O43934 449 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ECI2O75521 394 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 RASSF9O75901 435 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 NFATC1O95644 943 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MT-ND5P03915 603 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ATXN1LP0C7T5 689 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 ARSAP15289 507 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PSMC3P17980 439 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ITGALP20701 1170 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TGM2P21980 687 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 FCARP24071 287 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 OR1E1P30953 314 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SERPINB6P35237 376 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PXNP49023 591 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 NUMBP49757 651 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 CDH4P55283 916 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 EIF3EP60228 445 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 OTUD4Q01804 1114 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 TFF2Q03403 129 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 GBE1Q04446 702 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 GAD2Q05329 585 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 C2orf54Q08AI8 447 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SEMA3BQ13214 749 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 DPYSQ14117 519 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 HLXQ14774 488 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 PDGFRLQ15198 375 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TAZQ16635 292 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ZIK1Q3SY52 487 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 PLA1AQ53H76 456 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 FAM209BQ5JX69 171 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 LY6G5CQ5SRR4 150 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MANEALQ5VSG8 457 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 NCBP2-AS2Q69YL0 99 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SP5Q6BEB4 398 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 LAYNQ6UX15 382 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 BBS12Q6ZW61 710 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 B4GALNT4Q76KP1 1039 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TMEM25Q86YD3 366 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 KLHL7Q8IXQ5 586 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ZNF683Q8IZ20 524 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 OR2C3Q8N628 320 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PLD5Q8N7P1 536 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 CEP112Q8N8E3 955 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 RTL3Q8N8U3 475 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 MNS1Q8NEH6 495 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 CSGALNACT1Q8TDX6 532 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 DEPDC1BQ8WUY9 529 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ASB10Q8WXI3 467 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 P3H4Q92791 437 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PMM1Q92871 262 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SPSB4Q96A44 273 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MAGOHBQ96A72 148 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 FAF2Q96CS3 445 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 OTUB2Q96DC9 234 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SGCZQ96LD1 299 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PRICKLE1Q96MT3 831 aaPredicted RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 MOGAT1Q96PD6 335 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TRMT61BQ9BVS5 477 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 BBS2Q9BXC9 721 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SLC39A8Q9C0K1 460 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 EBF3Q9H4W6 596 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 PRDM16Q9HAZ2 1276 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TRPV4Q9HBA0 871 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 SPHK2Q9NRA0 654 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 TMEM248Q9NWD8 314 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 DONSONQ9NYP3 566 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 EPS15L1Q9UBC2 864 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 STOML2Q9UJZ1 356 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 ITGB1BP2Q9UKP3 347 aa6.83□□□□□ -1.32
PVT1-214ENST00000522875 MRPS17Q9Y2R5 130 aaKnown RBP6.83□□□□□ -1.32
PVT1-214ENST00000522875 DENND4AQ7Z401 1863 aa6.82□□□□□ -1.32
PVT1-214ENST00000522875 IGLV3-10A0A075B6K4 115 aa6.82□□□□□ -1.32
PVT1-214ENST00000522875 TRGV11A0A075B6L2 103 aa6.82□□□□□ -1.32
PVT1-214ENST00000522875 A0A1B0GVM2 712 aa6.82□□□□□ -1.32
PVT1-214ENST00000522875 CTAGE15A4D2H0 777 aa6.82□□□□□ -1.32
PVT1-214ENST00000522875 ARHGAP42A6NI28 874 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms