RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 SMAD5Q99717 465 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 APOL4Q9BPW4 351 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TWSG1Q9GZX9 223 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 BFARQ9NZS9 450 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 EPHA6Q9UF33 1036 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 MEIOCA2RUB1 952 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 RRN3P2A6NIE6 340 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 WDR64B1ANS9 1081 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 AKR7A2O43488 359 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TSPAN3O60637 253 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 UGT2B17O75795 530 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 POP7O75817 140 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TSPAN12O95859 305 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TNNC2P02585 160 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 H2AFB1P0C5Y9 115 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 H2AFB2P0C5Z0 115 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 DDX6P26196 483 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CAPGP40121 348 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 UGT2B15P54855 530 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 BCAR1P56945 870 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ACTR1AP61163 376 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 HERVK_113P63132 956 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TUBB3Q13509 450 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ANGPT1Q15389 498 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KNOP1Q1ED39 458 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KLHL26Q53HC5 615 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PAN3Q58A45 887 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PIGGQ5H8A4 983 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 SEL1L2Q5TEA6 688 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 IRAK1BP1Q5VVH5 260 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 SLC27A4Q6P1M0 643 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 LMBR1LQ6UX01 489 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CHSY3Q70JA7 882 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 OVCH2Q7RTZ1 564 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CAMKMTQ7Z624 323 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TBC1D10CQ8IV04 446 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZDHHC14Q8IZN3 488 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PYROXD2Q8N2H3 581 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 AGBL3Q8NEM8 1001 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CHST13Q8NET6 341 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 SETD6Q8TBK2 473 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ALG3Q92685 438 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KIAA1191Q96A73 305 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 EEF2KMTQ96G04 330 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PWWP2AQ96N64 755 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KCNC2Q96PR1 638 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CDC6Q99741 560 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 SSX3Q99909 188 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TDRD3Q9H7E2 651 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZSCAN32Q9NX65 697 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 IFT80Q9P2H3 777 aaPredicted RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ASH2LQ9UBL3 628 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 WARS2Q9UGM6 360 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 NDRG3Q9UGV2 375 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 GPR34Q9UPC5 381 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 BTBD3Q9Y2F9 522 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZFP37Q9Y6Q3 630 aaPredicted RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 U3KQ87 197 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 SIGLEC1Q9BZZ2 1709 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 C10orf71Q711Q0 1435 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 LOC100506127A0A0U1RQW1 187 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 AGAP5A6NIR3 686 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 H7C2Y5 167 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 SLC30A4O14863 429 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 FRS3O43559 492 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 CST8O60676 142 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 TRIM3O75382 744 aaPredicted RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 SUPT20HL2P0C7V6 817 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ATF2P15336 505 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 OGNP20774 298 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 WARSP23381 471 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 POU1F1P28069 291 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 HTR1BP28222 390 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ANTXR2P58335 489 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF280AP59817 542 aaPredicted RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 HSF2Q03933 536 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 FADDQ13158 208 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 USP10Q14694 798 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF174Q15697 407 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 MLIPQ5VWP3 458 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 LAMTOR1Q6IAA8 161 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ZPBP2Q6X784 338 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 NAPRTQ6XQN6 538 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 EFL1Q7Z2Z2 1120 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF571Q7Z3V5 609 aaPredicted RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 CRLF3Q8IUI8 442 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 PCDH20Q8N6Y1 951 aaKnown RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 MARCH10Q8NA82 808 aaPredicted RBP8.18□□□□□ -1.1
HMGB4-204ENST00000522796 KYQ8NBH2 561 aa8.18□□□□□ -1.1
HMGB4-204ENST00000522796 DENND6BQ8NEG7 585 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms