RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SNAP47Q5SQN1 464 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 CAPRIN2Q6IMN6 1127 aaKnown RBP20.19■□□□□ 0.82
TRIM35-203ENST00000521253 DUS1LQ6P1R4 473 aaKnown RBP20.19■□□□□ 0.82
TRIM35-203ENST00000521253 CES3Q6UWW8 571 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 ZNF248Q8NDW4 579 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 MCUQ8NE86 351 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 HNRNPLLQ8WVV9 542 aaKnown RBP20.19■□□□□ 0.82
TRIM35-203ENST00000521253 MFSD3Q96ES6 412 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 TTC1Q99614 292 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 MRM3Q9HC36 420 aaKnown RBP20.19■□□□□ 0.82
TRIM35-203ENST00000521253 MARCH4Q9P2E8 410 aaPredicted RBP20.19■□□□□ 0.82
TRIM35-203ENST00000521253 SOX13Q9UN79 622 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 PCDHGA7Q9Y5G6 932 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 NBEAQ8NFP9 2946 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 A8MU76 341 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 GOLGA8MH3BSY2 632 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 RRP8O43159 456 aaKnown RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 AMD1P17707 334 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 CAPZBP47756 277 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 GFERP55789 205 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 C19orf48Q6RUI8 117 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 LDB1Q86U70 411 aaPredicted RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 JAMLQ86YT9 394 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 C17orf53Q8N3J3 647 aaPredicted RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 MPP5Q8N3R9 675 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 AGBL5Q8NDL9 886 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 JPH3Q8WXH2 748 aaPredicted RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 RSC1A1Q92681 617 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 NAF1Q96HR8 494 aaKnown RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 SERPINB12Q96P63 405 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 KCND1Q9NSA2 647 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 CATSPERZQ9NTU4 200 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 KLHL3Q9UH77 587 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 PCYOX1Q9UHG3 505 aa20.18■□□□□ 0.82
TRIM35-203ENST00000521253 MN1Q10571 1320 aaPredicted RBP20.18■□□□□ 0.82
TRIM35-203ENST00000521253 QSOX1O00391 747 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 CD3EAPO15446 510 aaKnown RBP20.17■□□□□ 0.82
TRIM35-203ENST00000521253 GSTM1P09488 218 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 MLNP12872 115 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 ARNTP27540 789 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 ITPKBP27987 946 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 SLC5A2P31639 672 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 CSTF2P33240 577 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRIM35-203ENST00000521253 PREPP48147 710 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 MAPK10P53779 464 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 GSTM4Q03013 218 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 AARS2Q5JTZ9 985 aaKnown RBP20.17■□□□□ 0.82
TRIM35-203ENST00000521253 LRRC69Q6ZNQ3 347 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 ARHGAP22Q7Z5H3 698 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 PLXDC1Q8IUK5 500 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 NAT8LQ8N9F0 302 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 SLCO2A1Q92959 643 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 OR52A5Q9H2C5 316 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 XAB2Q9HCS7 855 aaKnown RBP20.17■□□□□ 0.82
TRIM35-203ENST00000521253 ANAPC5Q9UJX4 755 aa20.17■□□□□ 0.82
TRIM35-203ENST00000521253 CAPN5O15484 640 aaPredicted RBP20.16■□□□□ 0.82
TRIM35-203ENST00000521253 C9P02748 559 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 FTH1P02794 183 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 OR56A5P0C7T3 313 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 FGF3P11487 239 aaPredicted RBP20.16■□□□□ 0.82
TRIM35-203ENST00000521253 PDHA2P29803 388 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 PTGIRP43119 386 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 RPA4Q13156 261 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 PTK6Q13882 451 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 CASC4Q6P4E1 433 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 USP7Q93009 1102 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 TGM7Q96PF1 710 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 TRIM56Q9BRZ2 755 aaKnown RBP20.16■□□□□ 0.82
TRIM35-203ENST00000521253 OCIAD1Q9NX40 245 aa20.16■□□□□ 0.82
TRIM35-203ENST00000521253 ZFYVE26Q68DK2 2539 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 SDR42E2A6NKP2 422 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 C9orf172C9J069 976 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 NVLO15381 856 aaKnown RBP20.15■□□□□ 0.82
TRIM35-203ENST00000521253 PRAMEF10O60809 474 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 VAPBO95292 243 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 PPARGP37231 505 aaPredicted RBP20.15■□□□□ 0.82
TRIM35-203ENST00000521253 LEPRP48357 1165 aaKnown RBP20.15■□□□□ 0.82
TRIM35-203ENST00000521253 TTPAP49638 278 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 PLCL1Q15111 1095 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 RNASEH2BQ5TBB1 312 aaKnown RBP20.15■□□□□ 0.82
TRIM35-203ENST00000521253 ARMC3Q5W041 872 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 NAPRTQ6XQN6 538 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 SPACA3Q8IXA5 215 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 KLHL7Q8IXQ5 586 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 PPIL6Q8IXY8 311 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 ZFPM2Q8WW38 1151 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 KCNE4Q8WWG9 221 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 ELMO1Q92556 727 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 C9orf72Q96LT7 481 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 KIR3DX1Q9H7L2 352 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 SAMD15Q9P1V8 674 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 ASIC3Q9UHC3 531 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 SLC24A2Q9UI40 661 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 HEBP2Q9Y5Z4 205 aa20.15■□□□□ 0.82
TRIM35-203ENST00000521253 EFCAB7A8K855 629 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 GOLGA8KD6RF30 607 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 GOLGA8TH3BQL2 631 aa20.14■□□□□ 0.81
TRIM35-203ENST00000521253 IFRD1O00458 451 aaPredicted RBP20.14■□□□□ 0.81
TRIM35-203ENST00000521253 LIN7AO14910 233 aaPredicted RBP20.14■□□□□ 0.81
TRIM35-203ENST00000521253 MAGEA3P43357 314 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms