RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CLDN9O95484 217 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CHRM1P11229 460 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 CD1EP15812 388 aa10□□□□□ -0.81
MCF2-209ENST00000520602 XIAPP98170 497 aa10□□□□□ -0.81
MCF2-209ENST00000520602 NAE1Q13564 534 aa10□□□□□ -0.81
MCF2-209ENST00000520602 PIGGQ5H8A4 983 aa10□□□□□ -0.81
MCF2-209ENST00000520602 NAIF1Q69YI7 327 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 SULT1C3Q6IMI6 304 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TPRG1Q6ZUI0 275 aa10□□□□□ -0.81
MCF2-209ENST00000520602 Q6ZVL8 140 aa10□□□□□ -0.81
MCF2-209ENST00000520602 GRASPQ7Z6J2 395 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 C11orf96Q7Z7L8 435 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TCEAL8Q8IYN2 117 aa10□□□□□ -0.81
MCF2-209ENST00000520602 C2orf73Q8N5S3 287 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 GPR150Q8NGU9 434 aa10□□□□□ -0.81
MCF2-209ENST00000520602 WFDC5Q8TCV5 224 aa10□□□□□ -0.81
MCF2-209ENST00000520602 ASZ1Q8WWH4 475 aa10□□□□□ -0.81
MCF2-209ENST00000520602 AP2M1Q96CW1 435 aa10□□□□□ -0.81
MCF2-209ENST00000520602 L3HYPDHQ96EM0 354 aa10□□□□□ -0.81
MCF2-209ENST00000520602 C9orf16Q9BUW7 83 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SCN4AP35499 1836 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SYN1P17600 705 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SOAT1P35610 550 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SH3BGRP55822 239 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 IRX1P78414 480 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 NTHL1P78549 312 aa10□□□□□ -0.81
MCF2-209ENST00000520602 LRRC74AQ0VAA2 488 aa10□□□□□ -0.81
MCF2-209ENST00000520602 GPR33Q49SQ1 333 aa10□□□□□ -0.81
MCF2-209ENST00000520602 C6orf136Q5SQH8 315 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CRTC3Q6UUV7 619 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CYP20A1Q6UW02 462 aa10□□□□□ -0.81
MCF2-209ENST00000520602 PDSS2Q86YH6 399 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SLC44A2Q8IWA5 706 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 RAVER1Q8IY67 606 aaKnown RBP10□□□□□ -0.81
MCF2-209ENST00000520602 NXPE1Q8N323 547 aa10□□□□□ -0.81
MCF2-209ENST00000520602 LIX1Q8N485 282 aa10□□□□□ -0.81
MCF2-209ENST00000520602 DHRSXQ8N5I4 330 aa10□□□□□ -0.81
MCF2-209ENST00000520602 FAM47BQ8NA70 645 aa10□□□□□ -0.81
MCF2-209ENST00000520602 ZNF555Q8NEP9 628 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TNIP2Q8NFZ5 429 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CD200R1Q8TD46 325 aa10□□□□□ -0.81
MCF2-209ENST00000520602 OSCP1Q8WVF1 389 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SMG7Q92540 1137 aaKnown RBP10□□□□□ -0.81
MCF2-209ENST00000520602 ACAT2Q9BWD1 397 aa10□□□□□ -0.81
MCF2-209ENST00000520602 MTG2Q9H4K7 406 aa10□□□□□ -0.81
MCF2-209ENST00000520602 C11orf49Q9H6J7 331 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TNFRSF12AQ9NP84 129 aa10□□□□□ -0.81
MCF2-209ENST00000520602 IL26Q9NPH9 171 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TLR9Q9NR96 1032 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TBC1D14Q9P2M4 693 aa10□□□□□ -0.81
MCF2-209ENST00000520602 RNF11Q9Y3C5 154 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CARNS1A5YM72 827 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 K7EPI3 171 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 LIN7AO14910 233 aaPredicted RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 HNRNPRO43390 633 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 RNASEH2AO75792 299 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 BPIP17213 487 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 GPR1P46091 355 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 CXorf57Q6NSI4 855 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 GDPD4Q6W3E5 623 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 OR2T12Q8NG77 320 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ATOH8Q96SQ7 321 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 LINC00597Q9H2U6 94 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 DDX18Q9NVP1 670 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 MYRFQ9Y2G1 1151 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 A0A0G2JMZ2 1700 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 DICER1Q9UPY3 1922 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 STX16O14662 325 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 PRAMEF12O95522 483 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 IGLV3-27P01718 113 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 COX7A2P14406 83 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 WASP42768 502 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 HTR6P50406 440 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 RHDQ02161 417 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 CHIT1Q13231 466 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 HIST2H2ACQ16777 129 aaPredicted RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 HIST2H2AA3Q6FI13 130 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 KBTBD6Q86V97 674 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 OR10A6Q8NH74 314 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 SUSD6Q92537 303 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 NRBF2Q96F24 287 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 DYRK1BQ9Y463 629 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 INSL6Q9Y581 213 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 FAM92AA1XBS5 289 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 RNASEH1O60930 286 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 FTH1P02794 183 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ZDHHC11BP0C7U3 371 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 GSK3BP49841 420 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ZNF648Q5T619 568 aaPredicted RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 AP1ARQ63HQ0 302 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 PGM2L1Q6PCE3 622 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ZNF783Q6ZMS7 281 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 ADGRG2Q8IZP9 1017 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 POF1BQ8WVV4 589 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 MTERF1Q99551 399 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 RIOK2Q9BVS4 552 aaKnown RBP9.99□□□□□ -0.81
MCF2-209ENST00000520602 EBPLQ9BY08 206 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 NEU3Q9UQ49 428 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 SNX5Q9Y5X3 404 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms