RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ERVFC1-1P60608 527 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 YWHAHQ04917 246 aaPredicted RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 FOXM1Q08050 763 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE1Q13065 139 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 GAGE4Q13068 117 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ZNF273Q14593 569 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 NR1D2Q14995 579 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 DLG2Q15700 870 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 MEP1BQ16820 701 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 LETM2Q2VYF4 491 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 MYLK3Q32MK0 819 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 TMEM198Q66K66 360 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 TYW3Q6IPR3 259 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 ZNF449Q6P9G9 518 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 LINC00696Q6ZRV3 163 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 HAUS6Q7Z4H7 955 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ADIPOR2Q86V24 386 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 IQCHQ86VS3 1027 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 DSELQ8IZU8 1212 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 TEX9Q8N6V9 391 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 IQUBQ8NA54 791 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 FIBINQ8TAL6 211 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 THAP6Q8TBB0 222 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 HM13Q8TCT9 377 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ATL1Q8WXF7 558 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 MR1Q95460 341 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 IGSF21Q96ID5 467 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 LRRC3BQ96PB8 259 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 SLC25A33Q9BSK2 321 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 HAUS8Q9BT25 410 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 PPIL3Q9H2H8 161 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 PIGMQ9H3S5 423 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ANKZF1Q9H8Y5 726 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 C17orf75Q9HAS0 396 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 OLAHQ9NV23 265 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 DDX43Q9NXZ2 648 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 LEF1Q9UJU2 399 aaPredicted RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 AGO1Q9UL18 857 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 PA2G4Q9UQ80 394 aaKnown RBP3.98□□□□□ -1.77
SQLE-204ENST00000520493 KLHL20Q9Y2M5 609 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 NME7Q9Y5B8 376 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 ABCC9O60706 1549 aa3.98□□□□□ -1.77
SQLE-204ENST00000520493 EDDM13A0A1B0GTR0 161 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 A0A1B0GUV1 79 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 ARHGEF37A1IGU5 675 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 DDX39AO00148 427 aaKnown RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 DNM1LO00429 736 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 NDUFS4O43181 175 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 TADA2AO75478 443 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 SRCP12931 536 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 STX2P32856 288 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 MATR3P43243 847 aaKnown RBP eCLIP3.97□□□□□ -1.778e-7■■■■■ 27.3
SQLE-204ENST00000520493 LIMK1P53667 647 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 TUBA1BP68363 451 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 AP1B1Q10567 949 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 RALGDSQ12967 914 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 PTK6Q13882 451 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 KRT33BQ14525 404 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 PTPRCAPQ14761 206 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 SYT16Q17RD7 645 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 SMU1Q2TAY7 513 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 NSUN5P2Q63ZY6 315 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 ALKBH5Q6P6C2 394 aaKnown RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 PAPD4Q6PIY7 484 aaKnown RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 CNSTQ6PJW8 725 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 FAM198BQ6UWH4 519 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 ARMC9Q7Z3E5 817 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 CCDC190Q86UF4 302 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 CEP57Q86XR8 500 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 ERC1Q8IUD2 1116 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 BEST3Q8N1M1 668 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 GCSAMQ8N6F7 178 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 CAMKVQ8NCB2 501 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 PAPD5Q8NDF8 572 aaKnown RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 CFAP61Q8NHU2 1237 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 EXOC4Q96A65 974 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 SPACA9Q96E40 222 aaPredicted RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 ZNF830Q96NB3 372 aaPredicted RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 FERMT1Q9BQL6 677 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 MGME1Q9BQP7 344 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 DNAJC18Q9H819 358 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 NOL11Q9H8H0 719 aaKnown RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 ZNF556Q9HAH1 456 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 PCDH9Q9HC56 1237 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 CHMP1AQ9HD42 196 aaPredicted RBP3.97□□□□□ -1.77
SQLE-204ENST00000520493 CNGB3Q9NQW8 809 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 OCIAD1Q9NX40 245 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 HAO2Q9NYQ3 351 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 CACNG4Q9UBN1 327 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 CDC14AQ9UNH5 594 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 LIPGQ9Y5X9 500 aa3.97□□□□□ -1.77
SQLE-204ENST00000520493 OR6C76A6NM76 312 aa3.96□□□□□ -1.78
SQLE-204ENST00000520493 ANXA2P2A6NMY6 339 aa3.96□□□□□ -1.78
SQLE-204ENST00000520493 H3BQ06 376 aaPredicted RBP3.96□□□□□ -1.78
SQLE-204ENST00000520493 HS3ST1O14792 307 aa3.96□□□□□ -1.78
SQLE-204ENST00000520493 LINC01565O15544 149 aa3.96□□□□□ -1.78
SQLE-204ENST00000520493 ZIC3O60481 467 aa3.96□□□□□ -1.78
SQLE-204ENST00000520493 PPP1R3DO95685 299 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms