RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CYP4A22Q5TCH4 519 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 PAPD7Q5XG87 772 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 SLC18B1Q6NT16 456 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 TTI2Q6NXR4 508 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 GET4Q7L5D6 327 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 YTHDF3Q7Z739 585 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 ZC3H3Q8IXZ2 948 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MLKLQ8NB16 471 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 ITFG1Q8TB96 612 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 SPPL2BQ8TCT7 592 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 TAS1R2Q8TE23 839 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MYADMQ96S97 322 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 SYT15Q9BQS2 421 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MRPL45Q9BRJ2 306 aaKnown RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 EPHX3Q9H6B9 360 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 ARMCX3Q9UH62 379 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MUTYHQ9UIF7 546 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 GTF3C4Q9UKN8 822 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 CDH9Q9ULB4 789 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 CDH7Q9ULB5 785 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MYH15Q9Y2K3 1946 aa7.13□□□□□ -1.27
SDCBP-208ENST00000520228 MYBPHLA2RUH7 354 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 NPIPB13A6NJU9 1138 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 C2CD4BA6NLJ0 364 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 A8MXQ7 604 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 NPIPB4C9JG80 1138 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 MCIDASD6RGH6 385 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 PI4K2BG5E9Z4 385 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ZNF197O14709 1029 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 HCRTO43612 131 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 N4BP1O75113 896 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ATP2C2O75185 946 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 FGFR1OPO95684 399 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 GNA14O95837 355 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ASS1P00966 412 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 HAPLN1P10915 354 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 LAMP2P13473 410 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 MXI1P50539 228 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 CDH8P55286 799 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SRSF4Q08170 494 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SEMA3AQ14563 771 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 VEPH1Q14D04 833 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 MAPRE1Q15691 268 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 TAF12Q16514 161 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 CCDC40Q4G0X9 1142 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 KRT39Q6A163 491 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ANO7Q6IWH7 933 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 DPY19L2P1Q6NXN4 242 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 FAM171BQ6P995 826 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SCARA5Q6ZMJ2 495 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 C4orf50Q6ZRC1 276 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 DNAJB7Q7Z6W7 309 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ITIH5Q86UX2 942 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SPATA2LQ8IUW3 424 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 CPOQ8IVL8 374 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ARL14EPQ8N8R7 260 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 LEMD2Q8NC56 503 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 GPT2Q8TD30 523 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ING5Q8WYH8 240 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 FGF13Q92913 245 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 COG8Q96MW5 612 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 TWNKQ96RR1 684 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 PKMYT1Q99640 499 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 PI4K2AQ9BTU6 479 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 PRSS22Q9GZN4 317 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SMYD3Q9H7B4 428 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 RMI1Q9H9A7 625 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 MOV10Q9HCE1 1003 aaKnown RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ASAH2Q9NR71 780 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 EPS15L1Q9UBC2 864 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 RWDD2AQ9UIY3 292 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 DNAJC16Q9Y2G8 782 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 PKP3Q9Y446 797 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ASB3Q9Y575 518 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 ZFP37Q9Y6Q3 630 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-208ENST00000520228 NCOR1O75376 2440 aa7.12□□□□□ -1.27
SDCBP-208ENST00000520228 SAC3D1A6NKF1 404 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 STX16-NPEPL1H3BU86 382 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 STX16O14662 325 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 FGF19O95750 216 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 CYP2F1P24903 491 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 RPL10AP62906 217 aaKnown RBP7.11□□□□□ -1.27
SDCBP-208ENST00000520228 NOP14P78316 857 aaKnown RBP7.11□□□□□ -1.27
SDCBP-208ENST00000520228 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 CFAP221Q4G0U5 840 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 MDH1BQ5I0G3 518 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 SPOPLQ6IQ16 392 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 CEP70Q8NHQ1 597 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 SEMA4DQ92854 862 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 PSMG2Q969U7 264 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 SLC35C1Q96A29 364 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 TCEAL4Q96EI5 215 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 C1QTNF1Q9BXJ1 281 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 SDCBP2Q9H190 292 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 CYP3A43Q9HB55 503 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 IL21RQ9HBE5 538 aa7.11□□□□□ -1.27
SDCBP-208ENST00000520228 APOBEC3GQ9HC16 384 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms