RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SSPNQ14714 243 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 NCF4Q15080 339 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 PLCL1Q15111 1095 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 HSP90B2PQ58FF3 399 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 DCAF10Q5QP82 559 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 RNF187Q5TA31 235 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 IRAK1BP1Q5VVH5 260 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 DENND2CQ68D51 928 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 IRGCQ6NXR0 463 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 TRIM65Q6PJ69 517 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 IGFL2Q6UWQ7 119 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 TRIM72Q6ZMU5 477 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 MARK2Q7KZI7 788 aaKnown RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 TECPR1Q7Z6L1 1165 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 SLFN11Q7Z7L1 901 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 C11orf96Q7Z7L8 435 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 MRGPREQ86SM8 312 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 CEP97Q8IW35 865 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 D2HGDHQ8N465 521 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 ZBTB2Q8N680 514 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 SPATA3Q8NHX4 192 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 CLIP3Q96DZ5 547 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 SCRN2Q96FV2 425 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 CCDC120Q96HB5 630 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 DHTKD1Q96HY7 919 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 FAM210AQ96ND0 272 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 GSDMAQ96QA5 445 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 PSKH2Q96QS6 385 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 MCCC1Q96RQ3 725 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 RUFY1Q96T51 708 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 EIF3CQ99613 913 aaKnown RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 RBCK1Q9BYM8 510 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 CHST8Q9H2A9 424 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 PDCL3Q9H2J4 239 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 CLSTN2Q9H4D0 955 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 NOL6Q9H6R4 1146 aaKnown RBP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 LRRC19Q9H756 370 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 ACP6Q9NPH0 428 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 KCND1Q9NSA2 647 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 TMEM98Q9Y2Y6 226 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 PPIL1Q9Y3C6 166 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.78□□□□□ -1.64
SDCBP-207ENST00000520168 SLC30A1Q9Y6M5 507 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 SCINQ9Y6U3 715 aa4.78□□□□□ -1.64
SDCBP-207ENST00000520168 IGHV5-51A0A0C4DH38 117 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 UBA6A0AVT1 1052 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TRIM49BA6NDI0 452 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 NPIPB15A6NHN6 443 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SLC9B1P1A6NJY1 282 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 BECN2A8MW95 431 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 A8MX80 341 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 GOLGA6L6A8MZA4 724 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CCL21O00585 134 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 KIF1CO43896 1103 aaKnown RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 NUAK1O60285 661 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 PMPCBO75439 489 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 MSL3P1P0C860 447 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 EBLN1P0CF75 366 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FOLR1P15328 257 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CYP11B1P15538 503 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 DESP17661 470 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 LHCGRP22888 699 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 RORAP35398 523 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 PBX1P40424 430 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CA7P43166 264 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 IL10RBQ08334 325 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CDO1Q16878 200 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 LONRF1Q17RB8 773 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 ANO6Q4KMQ2 910 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 COX20Q5RI15 118 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 AGAP9Q5VTM2 703 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 AGAP7PQ5VUJ5 663 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SASS6Q6UVJ0 657 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TMEM207Q6UWW9 146 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 WASH2PQ6VEQ5 465 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 RBM43Q6ZSC3 357 aaKnown RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FAM92BQ6ZTR7 304 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 Q6ZVL8 140 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 HSD11B1LQ7Z5J1 315 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TGIF2LYQ8IUE0 185 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TRIM59Q8IWR1 403 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SYTL1Q8IYJ3 562 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SMYD4Q8IYR2 804 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 BBS5Q8N3I7 341 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 DNAJB14Q8TBM8 379 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FAM172AQ8WUF8 416 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CENPIQ92674 756 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 RSC1A1Q92681 617 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 NINJ1Q92982 152 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF501Q96CX3 271 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CXorf40BQ96DE9 158 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 MTFMTQ96DP5 389 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms