RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CCNYL3P0C7X3 344 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF75DP51815 510 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF140P52738 457 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 RWDD2BP57060 319 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 SPARCL1Q14515 664 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 PRPSAP1Q14558 356 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 DUS1LQ6P1R4 473 aaKnown RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 RAD9BQ6WBX8 426 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 BPHLQ86WA6 291 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 KMT5CQ86Y97 462 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 CDKL3Q8IVW4 592 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 CFAP206Q8IYR0 622 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 D2HGDHQ8N465 521 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 LILRA3Q8N6C8 439 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 SIDT2Q8NBJ9 832 aaKnown RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 C9orf43Q8TAL5 461 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-205ENST00000519623 C12orf66Q96MD2 445 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 SPATA13Q96N96 652 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 CD180Q99467 661 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 C19orf43Q9BQ61 176 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 FAM96AQ9H5X1 160 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 PDE7BQ9NP56 450 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 SLC24A2Q9UI40 661 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 KCND3Q9UK17 655 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 RARRES3Q9UL19 164 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
CSMD1-205ENST00000519623 OR6C74A6NCV1 312 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TLCD2A6NGC4 264 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 KATNA1O75449 491 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TJP3O95049 919 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 CRTAMO95727 393 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 MT-ND3P03897 115 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 POLBP06746 335 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 EBLN1P0CF75 366 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 HSD11B2P80365 405 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 PDE1BQ01064 536 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 ACY1Q03154 408 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TUBB3Q13509 450 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
CSMD1-205ENST00000519623 DNTTIP2Q5QJE6 756 aaKnown RBP12.13□□□□□ -0.47
CSMD1-205ENST00000519623 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 CYB5D1Q6P9G0 228 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 MICALCLQ6ZW33 695 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 NXPE1Q8N323 547 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 RMDN2Q96LZ7 410 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 EPN3Q9H201 632 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 KIR3DX1Q9H7L2 352 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 FGF21Q9NSA1 209 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 FAM8A1Q9UBU6 413 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
CSMD1-205ENST00000519623 PIKFYVEQ9Y2I7 2098 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 IGLV3-16A0A075B6K0 115 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 TRBV5-4A0A0C4DH59 114 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 C17orf113A0A1B0GUU1 675 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 UBA6A0AVT1 1052 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 MACROD2A1Z1Q3 448 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 PIPSLA2A3N6 862 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 GRID2IPA4D2P6 1211 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CYSRT1A8MQ03 144 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 K7EM74 188 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CCL22O00626 93 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CREG1O75629 220 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 STK10O94804 968 aaKnown RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 NTRK1P04629 796 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 ATP1B2P14415 290 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 HADHAP40939 763 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CASRP41180 1078 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 PRLHRP49683 370 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CDKN1CP49918 316 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 KPNA2P52292 529 aaKnown RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 NAP1L1P55209 391 aaKnown RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 DNASE1L3Q13609 305 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 FAM199XQ6PEV8 388 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 FBXO38Q6PIJ6 1188 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 SNX20Q7Z614 316 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 OR4E2Q8NGC2 313 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 HEXDCQ8WVB3 486 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 DCUN1D1Q96GG9 259 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 PPP1R2P1Q96PQ5 205 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 COPS8Q99627 209 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CCM2Q9BSQ5 444 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
CSMD1-205ENST00000519623 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
CSMD1-205ENST00000519623 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms