RNA–Protein interactions for RNA: ENST00000519567.5

ERGIC1-204, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-204ENST00000519567 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 SLC12A9Q9BXP2 914 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 MKRN2Q9H000 416 aaKnown RBP11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 PARVBQ9HBI1 364 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 PTBP2Q9UKA9 531 aaKnown RBP11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 DNMT3AQ9Y6K1 912 aaPredicted RBP11.28□□□□□ -0.6
ERGIC1-204ENST00000519567 LAMA2P24043 3122 aaKnown RBP11.27□□□□□ -0.6
ERGIC1-204ENST00000519567 SLC5A10A0PJK1 596 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NCF1BA6NI72 391 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NCF1CA8MVU1 366 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 GPR89AB7ZAQ6 455 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 GFYI3L273 518 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 GIPC1O14908 333 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NARSO43776 548 aaKnown RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 RNGTTO60942 597 aaKnown RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SIX3O95343 332 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 ANXA5P08758 320 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 GPR89BP0CG08 455 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NCF1P14598 390 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 TRIM23P36406 574 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SCTRP47872 440 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 RPIAP49247 311 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 CTSCP53634 463 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 PKNOX1P55347 436 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 AP1S2P56377 157 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 PRKCQQ04759 706 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 CDC16Q13042 620 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 LCP2Q13094 533 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 TUBB3Q13509 450 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 CCINQ13939 588 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 BOP1Q14137 746 aaKnown RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 MLF2Q15773 248 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SYTL3Q4VX76 610 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 ZNF648Q5T619 568 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 ZNF852Q6ZMS4 543 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 UBE2R2Q712K3 238 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 MAVSQ7Z434 540 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 HORMAD1Q86X24 394 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SYNPOQ8N3V7 929 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 RPLP0P6Q8NHW5 317 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 UBTD2Q8WUN7 234 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NAT14Q8WUY8 206 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 FOPNLQ96NB1 174 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 EGFL8Q99944 293 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 EBF4Q9BQW3 602 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 HGH1Q9BTY7 390 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SHCBP1LQ9BZQ2 653 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 OR2AG1Q9H205 316 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 TCF7L2Q9NQB0 619 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 PHPT1Q9NRX4 125 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 MRGBPQ9NV56 204 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 UTP6Q9NYH9 597 aaKnown RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 MBD1Q9UIS9 605 aaPredicted RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 PCTPQ9UKL6 214 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 CDYLQ9Y232 598 aa11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3DA0A087WVF3 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3IA0A087WXS9 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3EA0A087X179 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3KA0A087X1G2 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 GOLGA8QA0A0J9YX86 632 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 GOLGA8OA6NCC3 632 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3FA6NER0 549 aaPredicted RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3LB9A6J9 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 GOLGA8NF8WBI6 632 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 K7ESM1 405 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 HGSO14964 777 aaPredicted RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 AZIN1O14977 448 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 MATN4O95460 622 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3HP0C7X1 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 PIK3CGP48736 1102 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 HNMTP50135 292 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 INHBCP55103 352 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 CDH13P55290 713 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 ACTN3Q08043 901 aaPredicted RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3GQ6DHY5 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3CQ6IPX1 549 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 RASGRP3Q8IV61 690 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 TBC1D3Q8IZP1 549 aaPredicted RBP11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 PELI3Q8N2H9 469 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 PLA2G15Q8NCC3 412 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 CEP70Q8NHQ1 597 aa11.26□□□□□ -0.61
ERGIC1-204ENST00000519567 AGR3Q8TD06 166 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms