RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PPP2R2CQ9Y2T4 447 aa9.14□□□□□ -0.95
HDAC3-215ENST00000519474 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
HDAC3-215ENST00000519474 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
HDAC3-215ENST00000519474 ZZEF1O43149 2961 aa9.14□□□□□ -0.95
HDAC3-215ENST00000519474 MN1Q10571 1320 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CCDC162PA2VCL2 907 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 OR51F1A6NGY5 319 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 ERI2A8K979 691 aaKnown RBP9.13□□□□□ -0.95
HDAC3-215ENST00000519474 TOX3O15405 576 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-215ENST00000519474 ANKRD34CP0C6C1 535 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 ITGALP20701 1170 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 ACRV1P26436 265 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 PDHA2P29803 388 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CXCR5P32302 372 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 PRLHRP49683 370 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 SEPHS1P49903 392 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CACNG1Q06432 222 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CDH17Q12864 832 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 SEMA5AQ13591 1074 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-215ENST00000519474 SKIDA1Q1XH10 827 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 MANEAQ5SRI9 462 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 C1QTNF12Q5T7M4 302 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CACHD1Q5VU97 1274 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 KIAA1614Q5VZ46 1190 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 VASH2Q86V25 355 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CLDN19Q8N6F1 224 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 PHC3Q8NDX5 983 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 HDAC10Q969S8 669 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 TGM7Q96PF1 710 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CCM2Q9BSQ5 444 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 MED4Q9NPJ6 270 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 WDR70Q9NW82 654 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 SIDT1Q9NXL6 827 aaKnown RBP9.13□□□□□ -0.95
HDAC3-215ENST00000519474 SLC2A6Q9UGQ3 507 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 RIMKLBQ9ULI2 386 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 PRSS21Q9Y6M0 314 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
HDAC3-215ENST00000519474 IGHV5-51A0A0C4DH38 117 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ERVH48-1M5A8F1 160 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 POLR1CO15160 346 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 CEP104O60308 925 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 C1QL1O75973 258 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 FGGP02679 453 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 RALBP11234 206 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 MTHFD1P11586 935 aaKnown RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ADRA1DP25100 572 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 FOXN2P32314 431 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 RAB15P59190 212 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 PPP1CAP62136 330 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 SH3BP2P78314 561 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ACVR1Q04771 509 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 COL9A2Q14055 689 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 SEPT6Q14141 434 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 DBN1Q16643 649 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 TSTD2Q5T7W7 516 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 CEACAM20Q6UY09 585 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 FAM92BQ6ZTR7 304 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 REXO1L1PQ8IX06 675 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 CACNA2D3Q8IZS8 1091 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 PRELID2Q8N945 189 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 EXD3Q8N9H8 876 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 DNAAF3Q8N9W5 541 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 OR13J1Q8NGT2 312 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ZDHHC12Q96GR4 267 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 TEFMQ96QE5 360 aaKnown RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 RANBP9Q96S59 729 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 NRTNQ99748 197 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 MAP3K3Q99759 626 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 SLC12A9Q9BXP2 914 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 OR52A5Q9H2C5 316 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ZNF768Q9H5H4 540 aaKnown RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 IMP3Q9NV31 184 aaKnown RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 SMARCAL1Q9NZC9 954 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 PAK5Q9P286 719 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 TMEM184BQ9Y519 407 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-215ENST00000519474 SDK2Q58EX2 2172 aa9.12□□□□□ -0.95
HDAC3-215ENST00000519474 LOC101059948A0A1B0GTJ6 334 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 HEATR9A2RTY3 570 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 CFAP99D6REC4 459 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 RAD1O60671 282 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 GOT2P00505 430 aaKnown RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 APRTP07741 180 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 FOLR1P15328 257 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 ZNF28P17035 718 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 NELFEP18615 380 aaKnown RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 MSNP26038 577 aaKnown RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 NPY2RP49146 381 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 LMAN1P49257 510 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 CYP4F2P78329 520 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 FOXM1Q08050 763 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms