RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SPDYE1Q8NFV5 336 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 ELMO1Q92556 727 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 AHCYL2Q96HN2 611 aaKnown RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 RMDN2Q96LZ7 410 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 C12orf66Q96MD2 445 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 INSM2Q96T92 566 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 DPYSL5Q9BPU6 564 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 CARD6Q9BX69 1037 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 NRSN2Q9GZP1 204 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 OR52A5Q9H2C5 316 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 DPH5Q9H2P9 285 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 EPB41L1Q9H4G0 881 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 RDH14Q9HBH5 336 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 IMP3Q9NV31 184 aaKnown RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 GNPTGQ9UJJ9 305 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 PRAMEF33A0A0G2JMD5 474 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 TRABD2BA6NFA1 517 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 TMX2-CTNND1H3BSU7 103 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 DUX1O43812 170 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 CCKBRP32239 447 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 INHBCP55103 352 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 PLOD1Q02809 727 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 ZFP36L1Q07352 338 aaKnown RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 SPANXN3Q5MJ09 141 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 ZNF470Q6ECI4 717 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 PTRHD1Q6GMV3 140 aaKnown RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 TMPRSS9Q7Z410 1059 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 B3GNT8Q7Z7M8 397 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 IGDCC3Q8IVU1 814 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 LMNTD2Q8IXW0 634 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 CALML6Q8TD86 181 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 LPGAT1Q92604 370 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 ATXN7L3BQ96GX2 97 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 NUDT22Q9BRQ3 303 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 TBC1D10AQ9BXI6 508 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 FOXP3Q9BZS1 431 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 EPB41L5Q9HCM4 733 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 C20orf96Q9NUD7 363 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 INTS10Q9NVR2 710 aaKnown RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 VPS9D1Q9Y2B5 631 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 HEBP2Q9Y5Z4 205 aa21.5■■□□□ 1.03
VEGFA-217ENST00000518538 CFAP20Q9Y6A4 193 aaKnown RBP21.5■■□□□ 1.03
VEGFA-217ENST00000518538 UBA6A0AVT1 1052 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 C1QTNF9BB2RNN3 333 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 IFRD1O00458 451 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 C1QTNF9P0C862 333 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 PDHA2P29803 388 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 CSF2RBP32927 897 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 ELK3P41970 407 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 PREPP48147 710 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 CD151P48509 253 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 ADARP55265 1226 aaKnown RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 EIF3BP55884 814 aaKnown RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 CBLBQ13191 982 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 BOP1Q14137 746 aaKnown RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 GPR18Q14330 331 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 CENPUQ71F23 418 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 SLITRK4Q8IW52 837 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 MNS1Q8NEH6 495 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 LKAAEAR1Q8TD35 194 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 NXPE2Q96DL1 559 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 LIN37Q96GY3 246 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-217ENST00000518538 PANX3Q96QZ0 392 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 FAM167BQ9BTA0 163 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 GRHL1Q9NZI5 618 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 TEX264Q9Y6I9 313 aa21.49■■□□□ 1.03
VEGFA-217ENST00000518538 SLC5A10A0PJK1 596 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 IQCF5A8MTL0 148 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 E7ESA3 106 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 ITGB6P18564 788 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 MAPK9P45984 424 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 PPM1FP49593 454 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-217ENST00000518538 CFHR1Q03591 330 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 RTP5Q14D33 572 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 SYTL3Q4VX76 610 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 C8orf74Q6P047 294 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 DUS1LQ6P1R4 473 aaKnown RBP21.48■■□□□ 1.03
VEGFA-217ENST00000518538 WDR74Q6RFH5 385 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-217ENST00000518538 PDZD3Q86UT5 571 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 KCNMB4Q86W47 210 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 OR4D9Q8NGE8 314 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 ZFPM2Q8WW38 1151 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 BIRC8Q96P09 236 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 WDR83Q9BRX9 315 aaKnown RBP21.48■■□□□ 1.03
VEGFA-217ENST00000518538 STRADBQ9C0K7 418 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 SEMA6CQ9H3T2 930 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 ZC3H7BQ9UGR2 993 aaKnown RBP21.48■■□□□ 1.03
VEGFA-217ENST00000518538 CHMP2BQ9UQN3 213 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 COLEC10Q9Y6Z7 277 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 PIKFYVEQ9Y2I7 2098 aa21.48■■□□□ 1.03
VEGFA-217ENST00000518538 H3BMM5 538 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 UBXN7O94888 489 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 S1PR4O95977 384 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 ESR1P03372 595 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 HOXB3P14651 431 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-217ENST00000518538 NDUFS1P28331 727 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 CCR7P32248 378 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 PDIA2Q13087 525 aaKnown RBP21.47■■□□□ 1.03
VEGFA-217ENST00000518538 BRD3Q15059 726 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 CTSL3PQ5NE16 218 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms