RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 PIRTP0C851 137 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 EDN3P14138 238 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 HLA-DPA1P20036 260 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 CDH3P22223 829 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 KPNA2P52292 529 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 SOX8P57073 446 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 DPYSL3Q14195 570 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 SSPNQ14714 243 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 LLGL1Q15334 1064 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 ASIC2Q16515 512 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 HADHQ16836 314 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 ATP13A5Q4VNC0 1218 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 PRAMEF17Q5VTA0 474 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 CCDC70Q6NSX1 233 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 CUZD1Q86UP6 607 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 CCNYQ8ND76 341 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 ZNF552Q9H707 407 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 SLC24A2Q9UI40 661 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 SERTAD3Q9UJW9 196 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 NTNG1Q9Y2I2 539 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 ITPR3Q14573 2671 aa11.15□□□□□ -0.62
TRAPPC9-203ENST00000517667 ZFHX3Q15911 3703 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 A0A1B0GUH1 482 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR6C74A6NCV1 312 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 E7EQ34 232 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 POP7O75817 140 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 KLF7O75840 302 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 MBD3O95983 291 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 CD48P09326 243 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 HMGCLP35914 325 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 FOLR3P41439 243 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 PRKCIP41743 596 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 PREPP48147 710 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 IFI35P80217 286 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 PDK2Q15119 407 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 SLC14A2Q15849 920 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 PTCHD3Q3KNS1 767 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZNF789Q5FWF6 425 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 LDLRAP1Q5SW96 308 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 METRNLQ641Q3 311 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZNF571Q7Z3V5 609 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 GDF7Q7Z4P5 450 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 NT5DC3Q86UY8 548 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 KCNMB4Q86W47 210 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 MAP7D3Q8IWC1 876 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 OR1L3Q8NH93 324 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 PPP4R1Q8TF05 950 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 WDR77Q9BQA1 342 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 ISCUQ9H1K1 167 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 GPN3Q9UHW5 284 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 POMT2Q9UKY4 750 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 TMPRSS11EQ9UL52 423 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 ACSL5Q9ULC5 683 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 OSGIN2Q9Y236 505 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 COLEC10Q9Y6Z7 277 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 HIVEP1P15822 2718 aa11.14□□□□□ -0.63
TRAPPC9-203ENST00000517667 SLC9B1P1A6NJY1 282 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 KCNK1O00180 336 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 DDX3XO00571 662 aaKnown RBP eCLIP11.13□□□□□ -0.639e-7■■■□□ 18.6
TRAPPC9-203ENST00000517667 LDB2O43679 373 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 ZG16O60844 167 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 LCA5LO95447 670 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 SLC35G4P0C7Q5 338 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 PYGMP11217 842 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 SPTBP11277 2137 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 NDUFS1P28331 727 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 PTGER4P35408 488 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 SSR1P43307 286 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 TSFMP43897 325 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 ARSEP51690 589 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 MYL5Q02045 173 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 GBE1Q04446 702 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 ITGA9Q13797 1035 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 NFE2L1Q14494 772 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 PCSK7Q16549 785 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 B3GNTL1Q67FW5 361 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 FAM83HQ6ZRV2 1179 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 GPR135Q8IZ08 494 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 RASGEF1AQ8N9B8 481 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 KCTD6Q8NC69 237 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 DDHD1Q8NEL9 900 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 INSM2Q96T92 566 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 WWP1Q9H0M0 922 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 COPG2Q9UBF2 871 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 ANAPC7Q9UJX3 599 aa11.13□□□□□ -0.63
TRAPPC9-203ENST00000517667 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms