RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GIMAP2Q9UG22 337 aa10.7□□□□□ -0.7
PCDHGA1-202ENST00000517417 PCDHGA7Q9Y5G6 932 aa10.7□□□□□ -0.7
PCDHGA1-202ENST00000517417 HEMK1Q9Y5R4 338 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRBV23OR9-2A0A075B6M9 112 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SH3PXD2BA1X283 911 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC28A1O00337 649 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 IRAK2O43187 625 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NDUFB5O43674 189 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 AP1G1O43747 822 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC10A7Q0GE19 358 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NAE1Q13564 534 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 INO80DQ53TQ3 878 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 KIAA0930Q6ICG6 404 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NPAS4Q8IUM7 802 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR2T12Q8NG77 320 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NPY6RQ99463 290 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CD320Q9NPF0 282 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 MTMR10Q9NXD2 777 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 C3orf18Q9UK00 162 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CDC14AQ9UNH5 594 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SAMHD1Q9Y3Z3 626 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 LYVE1Q9Y5Y7 322 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NRXN2Q9P2S2 1712 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3DA0A087WVF3 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3IA0A087WXS9 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3EA0A087X179 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3KA0A087X1G2 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CARNS1A5YM72 827 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3LB9A6J9 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 H0YJX3 145 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SYN3O14994 580 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3HP0C7X1 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 LAG3P18627 525 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NTSP30990 170 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 GNPDA1P46926 289 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 RPIAP49247 311 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3CQ6IPX1 549 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 GDF6Q6KF10 455 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 THAP5Q7Z6K1 395 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D3Q8IZP1 549 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 ACVR1CQ8NER5 493 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 UBE2E3Q969T4 207 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 WRAP53Q9BUR4 548 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 KIFC1Q9BW19 673 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 IFT80Q9P2H3 777 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 PTBP2Q9UKA9 531 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 DYTNA2CJ06 578 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NRP1O14786 923 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NR2F1P10589 423 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 THRBP10828 461 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 ST13P50502 369 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CLCQ05315 142 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF829Q3KNS6 432 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 PLA2G4EQ3MJ16 856 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 PROSER1Q86XN7 944 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 COLGALT2Q8IYK4 626 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR13C4Q8NGS5 318 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 AUTS2Q8WXX7 1259 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SMG7Q92540 1137 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 NTAN1Q96AB6 310 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 PAWRQ96IZ0 340 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 GMPPBQ9Y5P6 360 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 ARL5AQ9Y689 179 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 H3BM21 787 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 JUNP05412 331 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CYP4B1P13584 511 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 AMD1P17707 334 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 IMPDH1P20839 514 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 CXCR2P25025 360 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 PCSK6P29122 969 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 INHBCP55103 352 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 EPS8Q12929 822 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 INAQ16352 499 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 USP39Q53GS9 565 aaKnown RBP10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 LYPLAL1Q5VWZ2 237 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 BORAQ6PGQ7 559 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 RNF111Q6ZNA4 994 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLCO6A1Q86UG4 719 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SVOPQ8N4V2 548 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 KDM1BQ8NB78 822 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 SMOXQ9NWM0 555 aa10.69□□□□□ -0.7
PCDHGA1-202ENST00000517417 IGKV6-21A0A0C4DH24 114 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 EOMESO95936 686 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 ACRP10323 421 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CDH4P55283 916 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CYP4F3Q08477 520 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 PDCD4Q53EL6 469 aaKnown RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 OGFOD2Q6N063 350 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRAF7Q6Q0C0 670 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CYP4V2Q6ZWL3 525 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CHST15Q7LFX5 561 aaPredicted RBP10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 TMPRSS11BQ86T26 416 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 CYP4Z2PQ8N1L4 340 aa10.68□□□□□ -0.7
PCDHGA1-202ENST00000517417 OR10G6Q8NH81 332 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms