RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PLLPQ9Y342 182 aa7.39□□□□□ -1.23
PDLIM5-219ENST00000514743 ACTL7AQ9Y615 435 aa7.39□□□□□ -1.23
PDLIM5-219ENST00000514743 SF3B1O75533 1304 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■■■■■ 150.1
PDLIM5-219ENST00000514743 A0A0A0MRY4 1105 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 C2orf74A8MZ97 194 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 MAGEC1O60732 1142 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 ATE1O95260 518 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 GSRP00390 522 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CAPNS1P04632 268 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CBLP22681 906 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 MAPK12P53778 367 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PUDPQ08623 228 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 EFR3AQ14156 821 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 MPP7Q5T2T1 576 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PRR23BQ6ZRT6 265 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 BHLHA9Q7RTU4 235 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 GPRIN1Q7Z2K8 1008 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FNDC5Q8NAU1 212 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TSPEARQ8WU66 669 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TFB1MQ8WVM0 346 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SPATA13Q96N96 652 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CAMK1GQ96NX5 476 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TEX12Q9BXU0 123 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC13A1Q9BZW2 595 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 C20orf27Q9GZN8 174 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PRDM8Q9NQV8 689 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SEMA3GQ9NS98 782 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 ARL8BQ9NVJ2 186 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SAGE1Q9NXZ1 904 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 WBP11Q9Y2W2 641 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TESMINQ9Y4I5 508 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM221BA6H8Z2 402 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 HACD1B0YJ81 288 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM72CH0Y354 149 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 RNF103O00237 685 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 NRP1O14786 923 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 DCLK1O15075 740 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 ENO3P13929 434 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CD247P20963 164 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC15A1P46059 708 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 GLUD2P49448 558 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FKBP1BP68106 108 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SEMA3BQ13214 749 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CAPRIN1Q14444 709 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM214AQ32MH5 1076 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TCHHL1Q5QJ38 904 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM72AQ5TYM5 149 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PIK3R6Q5UE93 754 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 WSCD1Q658N2 575 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM72DQ6L9T8 149 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TMEM65Q6PI78 240 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CYS1Q717R9 158 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CTU1Q7Z7A3 348 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM72BQ86X60 149 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PSTKQ8IV42 348 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 DPP10Q8N608 796 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 ZMIZ2Q8NF64 920 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 GTF2H4Q92759 462 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SNAPC3Q92966 411 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PTCD3Q96EY7 689 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF416Q9BWM5 594 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 STN1Q9H668 368 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 GPAMQ9HCL2 828 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PCDHGB4Q9UN71 923 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PCDHGB5Q9Y5G0 923 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 HRH3Q9Y5N1 445 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 PTCH2Q9Y6C5 1203 aa7.38□□□□□ -1.23
PDLIM5-219ENST00000514743 TRBV23-1A0A0A0MS06 115 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 FAM237BA0A1B0GVD1 139 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 WDR27A2RRH5 827 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 MYADML2A6NDP7 307 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CYB561D2O14569 222 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 COPEO14579 308 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 DENRO43583 198 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SMPD2O60906 423 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HUS1O60921 280 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 BCAS1O75363 584 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 KRT37O76014 449 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HTR3BO95264 441 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HBQ1P09105 142 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 COX5BP10606 129 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PTPN1P18031 435 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 NOS2P35228 1153 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ALDH3B2P48448 385 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CLCNKBP51801 687 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 KPNA2P52292 529 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ERVFC1P60507 584 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CRADDP78560 199 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CACNB2Q08289 660 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 MGAT3Q09327 533 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TRAF2Q12933 501 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 FLOT2Q14254 428 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF846Q147U1 533 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PAFAH1B3Q15102 231 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 MAPK11Q15759 364 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TMEM92Q6UXU6 159 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms